Miyakogusa Predicted Gene

Lj1g3v4431080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4431080.1 Non Chatacterized Hit- tr|I1JNT8|I1JNT8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.09,0,PROTEIN
TRANSLOCASE SECY SUBUNIT,NULL; SECY/SEC61-ALPHA FAMILY
MEMBER,SecY/SEC61-alpha family; SECYT,CUFF.32337.1
         (563 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30970.1                                                       925   0.0  
Glyma19g33790.1                                                       395   e-110
Glyma09g21690.1                                                       187   2e-47
Glyma06g30020.1                                                       122   7e-28
Glyma16g10120.1                                                        87   5e-17
Glyma06g36490.1                                                        80   5e-15

>Glyma03g30970.1 
          Length = 564

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/572 (82%), Positives = 498/572 (87%), Gaps = 22/572 (3%)

Query: 4   ATRFSPNHFLPHHHTFQTKPNALPRRTPPHRITFHRIGTPRVSLLNN--FPSLNRSLSHR 61
           ATRFSPNHF PH   FQTKPNAL  R   +    + IG  RVSL  N  F + NRSL  +
Sbjct: 3   ATRFSPNHFYPHR--FQTKPNALRERR--YVKCINGIGA-RVSLFTNPAFNASNRSLFPK 57

Query: 62  --RTLSVNFFDRLRSDSVEAESPNEEVVLLPSRGGDGGEAVVPT--------GDLQLKPR 111
             RTLSV+F DRLR D    +   EEVV  P+  GDGGEAV+ +        G LQLKP 
Sbjct: 58  LNRTLSVSFSDRLRGDYARVD---EEVV--PATRGDGGEAVISSSSPSANSSGTLQLKPL 112

Query: 112 MFRNRFLNFVRFGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQ 171
           MFRNRFLNF R GSVINGAAESFFKSEIRRRLFVTA+LIVISRVGYFIPLPGFDRRLIP+
Sbjct: 113 MFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAMLIVISRVGYFIPLPGFDRRLIPE 172

Query: 172 DYMSFVSGSSVDELGDFSSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDG 231
           DY+SFV+GSSVDELGDF++ELKLS+FQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDG
Sbjct: 173 DYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDG 232

Query: 232 QEKIKSYIWWMSFGFAILEALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTTWIC 291
            EKIKSYIWWMSFGFAILEALIV+CYSL YSIYAA++RVKHVMVTS LLVCGAMT TWIC
Sbjct: 233 HEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSILLVCGAMTITWIC 292

Query: 292 DTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSSVSWLPYVLAVLGIFTTVTMWA 351
           DTISESGFGQGSSLIICVGILTGYMETL+KMLTQLSVS+VSW PYVLAVLGIFT VTMWA
Sbjct: 293 DTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTIVTMWA 352

Query: 352 VVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSI 411
           VVVTEGCRKVKLQYYGFKLASAARE SPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSI
Sbjct: 353 VVVTEGCRKVKLQYYGFKLASAAREHSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSI 412

Query: 412 VAGLLQSPFWEHVKEMLNPETSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKM 471
           +A LL+SPFWEH KEMLNPETS+GAEPWVYYSIYAFFVFLFNIFDIAN+PKEIADYLNKM
Sbjct: 413 LASLLRSPFWEHAKEMLNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKM 472

Query: 472 GARIPNIKPGKATIEYLSKVQASTRFWGGXXXXXXXXXXXXXDHYLRRINAGFAIGFTSV 531
           GARIPNIKPGKATIEYLSKVQASTRFWGG             DHYLRR+NAGFAIGFTSV
Sbjct: 473 GARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRVNAGFAIGFTSV 532

Query: 532 LIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 563
           LIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 533 LIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 564


>Glyma19g33790.1 
          Length = 377

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/255 (77%), Positives = 217/255 (85%), Gaps = 13/255 (5%)

Query: 62  RTLSVNFFDRLRSDSVEAESPNEEVVLLPSRGGDGGEAVVPT-------GDLQLKPRMFR 114
           RTLSV+F DRLR D V  ++P  + V+  +RGGDGGEA++ +       G LQLKP MFR
Sbjct: 3   RTLSVSFSDRLRDDYVRVDAPRSKEVVPATRGGDGGEAILASSPSADNSGTLQLKPLMFR 62

Query: 115 NRFLNFVRFGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYM 174
           NRFLNF R GSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIP+DY+
Sbjct: 63  NRFLNFARLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYL 122

Query: 175 SFVSGSSVDELGDFSSELKLSLFQLGISPQII------ASIIMQVLCHVVPSLVKLRKEG 228
           SFV+GSSVDELGDF++ELKLS+FQLGISPQII      A I +QVLCHVVPSLV LRKEG
Sbjct: 123 SFVAGSSVDELGDFTAELKLSIFQLGISPQIINRVHYCADIHVQVLCHVVPSLVNLRKEG 182

Query: 229 LDGQEKIKSYIWWMSFGFAILEALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTT 288
           LDG EKIKSYIWWMSFGFAILEALIV+CYSL YSIYAA++RVKHVMVTS LLVCGAMT T
Sbjct: 183 LDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSVLLVCGAMTIT 242

Query: 289 WICDTISESGFGQGS 303
           WICDTISESGF   S
Sbjct: 243 WICDTISESGFDNQS 257



 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 32/33 (96%)

Query: 531 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 563
           +LI VGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 345 LLIQVGSIIELRRSYQAYNVMPSLSNALRRYGV 377


>Glyma09g21690.1 
          Length = 115

 Score =  187 bits (476), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/105 (85%), Positives = 92/105 (87%)

Query: 459 NLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGXXXXXXXXXXXXXDHYLR 518
           N+PKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGG             DHYLR
Sbjct: 11  NMPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATASSVLDHYLR 70

Query: 519 RINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 563
           R+NAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 71  RVNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 115


>Glyma06g30020.1 
          Length = 540

 Score =  122 bits (307), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 190/420 (45%), Gaps = 25/420 (5%)

Query: 133 SFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYMSFVSGSSVDELGDFSSEL 192
            FFK  +  +       + +SR+G +IPL G +R     +       S +  L  FS   
Sbjct: 123 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGN---LDQNSLLSTLDSFSGGG 179

Query: 193 --KLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRK-EGLDGQEKIKSYIWWMSFGFAIL 249
             +L +  LGI P I A I+ Q+L  V P L  L+K EG  G++K+  Y  + S GFAI+
Sbjct: 180 IGRLGVCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 239

Query: 250 EALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTTWICDTISESGFGQGSSLIICV 309
           +A+      L    Y      + V+ +  LL  G++ T +I + I++   G G+SL+I  
Sbjct: 240 QAI---GQVLFLRPYVNDFSTEWVISSVILLTLGSVFTMYIGERITDLKLGNGTSLLIFT 296

Query: 310 GILTGYMETLHKMLTQLSVSSVSWLPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFK 369
            I++    +  + + Q + +  +++     VL  F  V +  V V E  RK+ L Y    
Sbjct: 297 NIISYLPASFGRTIAQ-AFNDANYIGLGTIVLSFFLLV-VGIVYVQEAERKIPLNY---- 350

Query: 370 LASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGLLQSPFWEHVKEMLN 429
            AS    +S   E   Y+PF +N +G+ P++ ++  LA P  +A        +     LN
Sbjct: 351 -ASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKAAVALN 409

Query: 430 PETSIGAEPWVYYSIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEY 487
           P    G   ++ ++I   AFF + +    +   P ++++ L + GA IP ++PG+ T  +
Sbjct: 410 P----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGRTTATF 463

Query: 488 LSKVQASTRFWGGXXXXXXXXXXXXXDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQA 547
           +  V +     G              +  +  + A      TS+LI+VG   +  R  QA
Sbjct: 464 IKTVLSRISVLGSTFLAILAAGPAVVEQ-ITHLTAFRGFAGTSILILVGCATDTARKVQA 522


>Glyma16g10120.1 
          Length = 96

 Score = 87.0 bits (214), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/43 (88%), Positives = 39/43 (90%)

Query: 415 LLQSPFWEHVKEMLNPETSIGAEPWVYYSIYAFFVFLFNIFDI 457
           LL SPFWEHVKEMLN ETS+GA PWVYYSIY FFVFLFNIFDI
Sbjct: 35  LLSSPFWEHVKEMLNLETSVGAGPWVYYSIYVFFVFLFNIFDI 77


>Glyma06g36490.1 
          Length = 133

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 38/38 (100%)

Query: 376 EQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVA 413
           EQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSI+A
Sbjct: 23  EQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILA 60