Miyakogusa Predicted Gene

Lj1g3v4372220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4372220.1 tr|A9S8S4|A9S8S4_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,38.1,0.00000000002,no description,NULL;
seg,NULL,CUFF.32300.1
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33200.1                                                       343   1e-94
Glyma03g30280.1                                                       335   2e-92

>Glyma19g33200.1 
          Length = 260

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 178/267 (66%), Positives = 203/267 (76%), Gaps = 11/267 (4%)

Query: 1   MNSLSLGSFTLTYPPPCKFR----THLHPNFHNLYIKGANXXXXXXXXXXXXAPTSLRAS 56
           MNS+SLG+F  T PP CKFR    T   P FH+L   G               PT LRA+
Sbjct: 1   MNSISLGTFVFTPPPACKFRPLLQTKHQPIFHSLCSSGLTLSRISLTQ----KPTFLRAT 56

Query: 57  KSNFDAPVSLPEGNASFVPIEEIIEKDWSVLYHGDPSADNRIVSAGKVEESSRVLVSTGS 116
            SN DAP+SLPEG ASFV I EIIEKDWSVL   +    +RI+++G V ++SRVLVSTGS
Sbjct: 57  DSNTDAPISLPEG-ASFVSIPEIIEKDWSVLDCAEHRNIDRIIASGNVGQNSRVLVSTGS 115

Query: 117 EDFVDCLMGFSPFKSLLVVHDSLLILACIKEKDDGIKCWQGEITLVPEKWAPFDVVFLYF 176
           EDFVD L+G +P  S+ VVHDSLL LACIKEK D +KCWQGEI  VPEKWAPFD VFLYF
Sbjct: 116 EDFVDTLVGLTP--SVFVVHDSLLTLACIKEKYDRVKCWQGEIIYVPEKWAPFDAVFLYF 173

Query: 177 LPGLPFKLDEILGSLANKCSPGGRVIISHPQGRQALEQQREQYPEVVVSDLPDKTYLQTA 236
           LP L FKLD+ILGSLA KC+ GGRVIISHP+GR+ LEQQR+QYP+VVVSDLPDKTYLQ+ 
Sbjct: 174 LPALAFKLDQILGSLAGKCATGGRVIISHPKGREVLEQQRKQYPDVVVSDLPDKTYLQSV 233

Query: 237 AAANSFDVAEFVDEPSFYLAVLICSRA 263
           AAA+SFDVAEFVDEP  YLA+LICSRA
Sbjct: 234 AAAHSFDVAEFVDEPGLYLAILICSRA 260


>Glyma03g30280.1 
          Length = 250

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 174/263 (66%), Positives = 199/263 (75%), Gaps = 13/263 (4%)

Query: 1   MNSLSLGSFTLTYPPPCKFRTHLHPNFHNLYIKGANXXXXXXXXXXXXAPTSLRASKSNF 60
           MNS+SLGSF LT   PCKFR  L      ++                  PT LRA+ SN 
Sbjct: 1   MNSISLGSFILT---PCKFRPFLQTKHQPIF-------RTLSPIPLTQKPTFLRATDSNI 50

Query: 61  DAPVSLPEGNASFVPIEEIIEKDWSVLYHGDPSADNRIVSAGKVEESSRVLVSTGSEDFV 120
           DAP+SLPEG ASFV I EIIEKDWSVL   +    +RI+++G +E+SSRVLVSTGSEDFV
Sbjct: 51  DAPISLPEG-ASFVSIPEIIEKDWSVLDCAEHRTTDRIIASGNIEQSSRVLVSTGSEDFV 109

Query: 121 DCLMGFSPFKSLLVVHDSLLILACIKEKDDGIKCWQGEITLVPEKWAPFDVVFLYFLPGL 180
           D L G +P  S+ VVHDSLL LACIKEK D +KCWQGEI  VPEKWAPFD VFLYFLP L
Sbjct: 110 DSLAGLTP--SVFVVHDSLLTLACIKEKYDRVKCWQGEIIYVPEKWAPFDAVFLYFLPAL 167

Query: 181 PFKLDEILGSLANKCSPGGRVIISHPQGRQALEQQREQYPEVVVSDLPDKTYLQTAAAAN 240
           PFKL +IL SLA KC+PGGRVIISHP+G++ LEQQR+QYP+VVVSDLP+KTYLQ+ AAA+
Sbjct: 168 PFKLHQILESLAGKCAPGGRVIISHPKGKEVLEQQRKQYPDVVVSDLPNKTYLQSVAAAH 227

Query: 241 SFDVAEFVDEPSFYLAVLICSRA 263
           SFDVAEFVDEP  YLAVLICSRA
Sbjct: 228 SFDVAEFVDEPGLYLAVLICSRA 250