Miyakogusa Predicted Gene

Lj1g3v4328790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4328790.1 Non Chatacterized Hit- tr|Q8LFN8|Q8LFN8_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,53.78,2e-18,WRC,WRC; seg,NULL,CUFF.32369.1
         (336 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30170.1                                                       265   4e-71
Glyma19g33070.1                                                       238   5e-63
Glyma09g16880.1                                                       166   4e-41
Glyma02g28970.1                                                       111   1e-24

>Glyma03g30170.1 
          Length = 372

 Score =  265 bits (678), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 182/378 (48%), Positives = 213/378 (56%), Gaps = 48/378 (12%)

Query: 1   MRIRKSQTLFSS----FSLSDPHLTNRLPPALVQL--AVDAAPK----------AEEAPL 44
           MRIRK   LF S      LSDPHL NR  P +VQL  A   APK          A   P 
Sbjct: 1   MRIRKRPALFPSSLSPLRLSDPHLINR-SPVVVQLSDATSTAPKLSFSSSAHHAAFAHPS 59

Query: 45  SLDRCRPSDHPL----LPSNGCDDPSG--EGGAHRPQQRNKQEPLEEVEDVRGQLGKGDS 98
           +LDR +PSD PL      SNG DDPSG  E GAHR  Q NKQ+PL+EV  VR +   G+ 
Sbjct: 60  TLDRFQPSDQPLPLIGKQSNGSDDPSGIGESGAHR--QHNKQDPLDEV--VRRE-ESGED 114

Query: 99  AGEKGNHTRKGCIFGSEVMQVDSFPPPSPPSTQDGRWYDGERSIPLKKRRGSFENNNAT- 157
           +GEKGNH RKG  F SE  Q +  PP S  STQDGRWY+GE++IPLKKRRG+FE NN   
Sbjct: 115 SGEKGNHIRKGRTFDSEKTQAELLPPLSSSSTQDGRWYEGEKAIPLKKRRGNFEENNNNN 174

Query: 158 -----AASHDXXXXXXXXXXXCSSSATQNXXXXXXXXXXXSASN--------GKKRARGS 204
                +               CS+                             KKRARGS
Sbjct: 175 NAAAHSKKMMKAKMKTKMNKKCSTPRNNEDSTGEEEVKKKVEETIKVEVNVVSKKRARGS 234

Query: 205 AVMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMASVRNRSMKKEV--QDLLP 262
           A+MEGSRCSRVNGRGWRCCQ TLVGYSLCEHHLGKGRLRSM SVR+RS+      +++  
Sbjct: 235 ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIIASTAPKEVHV 294

Query: 263 QPXXXXXXXXXXXXXLERKNKSGGADYPLG-KSEKKAAVAV--TKKRMKLGMVKARSMSS 319
                          LE++ +      P G K EKK  + +  TKKRMKLGMVKARS+SS
Sbjct: 295 HHVPHPSSSSPSFCSLEKQIECVDDAEPFGEKEEKKPGIIMTSTKKRMKLGMVKARSISS 354

Query: 320 LMGQTNTQV-VVADENNK 336
           L+GQT+  +  VA EN+K
Sbjct: 355 LLGQTSNHIAAVAHENSK 372


>Glyma19g33070.1 
          Length = 325

 Score =  238 bits (608), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 174/282 (61%), Gaps = 25/282 (8%)

Query: 78  NKQEPLEEVEDVRGQLGKGDSAGEKGNHTRKGCIFGSEVMQVDSFPPPSPPSTQDGRWYD 137
           NKQ+PL+EV  VR +   G+ +GEKGNH+RKG  FGSE  Q +  PP SP STQDGRWY+
Sbjct: 46  NKQDPLDEV--VRREGESGEDSGEKGNHSRKGRSFGSEKTQAELLPPLSPSSTQDGRWYE 103

Query: 138 GERSIPLKKRRGSFENNNAT-AASHDXXXXXXXXXXXCSSSATQNXXXXXXXXXXXSASN 196
           GE++IPLKKRRG+FE NN   AA+H                +T+N               
Sbjct: 104 GEKAIPLKKRRGNFEENNNNNAATHSKKMKAKMKTKMNKKCSTRNKEDSMGEELDEEDEE 163

Query: 197 --------------GKKRARGSAVMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRL 242
                          KKRARGSA+MEGSRCSRVNGRGWRCCQ TLVGYSLCEHHLGKGRL
Sbjct: 164 EKKVEETKAEVNIVSKKRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRL 223

Query: 243 RSMASVRNRSMK----KEVQ-DLLPQPXXXXXXXXXXXXXLERKNKSGGAD--YPLGKSE 295
           RSM SVR+RS+     KEV    LP P             L+ +N+    D   P G  E
Sbjct: 224 RSMTSVRSRSIASTAPKEVHVHHLPDPSSSSSSPPPSFCSLDHENQIECVDNAEPFGDEE 283

Query: 296 KKAAVAVTKKRMKLGMVKARSMSSLMGQTNTQV-VVADENNK 336
           KK  + +TKKRMKLGMVKARS+SSL+GQTNTQ+  VA EN+K
Sbjct: 284 KKPEIIMTKKRMKLGMVKARSISSLLGQTNTQIAAVAHENSK 325


>Glyma09g16880.1 
          Length = 240

 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 127/233 (54%), Gaps = 50/233 (21%)

Query: 107 RKGCIFGSEVMQVDSFPPPSPPSTQDGRWYDGERSIPLKKRRGSFENNN---------AT 157
           RKG I  SE +  ++F  PSPP  QDGRW++G+++ PLKKRRG+FEN             
Sbjct: 25  RKGSISCSETL-AETFSSPSPPK-QDGRWFEGDKAFPLKKRRGAFENATEDDNNNNDNDD 82

Query: 158 AASHDXXXXXXXXXXXCSSSATQNXXXXXXXXXXXSASNGKKRARGSAVMEGSRCSRVNG 217
             + +            +   ++               N ++R RG A+MEGSRCSRVNG
Sbjct: 83  NDNKNLKTKGKRMKTKINQKCSRQDDSKEKEEEEEVRENEEERVRGGALMEGSRCSRVNG 142

Query: 218 RGWRCCQPTLVGYSLCEHHLGKGRLRSMASVRNRSMKKEVQDLLPQPXXXXXXXXXXXXX 277
           RGWRCCQ TLVGYSLCEHHLGKGRLRSM SVRN+S                         
Sbjct: 143 RGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKS------------------------- 177

Query: 278 LERKNKSGGADYPLGKSEKKAAVAVTKKRMKLGMVKARSMSSLMGQTNTQVVV 330
                        +G + KK  V VTK+RMKLGMVKARS+SSL+GQTNT++ +
Sbjct: 178 -------------IGTTSKK-QVIVTKRRMKLGMVKARSISSLLGQTNTEIYI 216


>Glyma02g28970.1 
          Length = 108

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/60 (85%), Positives = 55/60 (91%)

Query: 194 ASNGKKRARGSAVMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMASVRNRSM 253
           A+ GKKR RGSA+MEGSRCSRVNGRGWRC Q TLVGYSLCEHHLGKGRLRSM SVRN+S+
Sbjct: 31  ANVGKKRVRGSALMEGSRCSRVNGRGWRCFQQTLVGYSLCEHHLGKGRLRSMTSVRNKSI 90