Miyakogusa Predicted Gene

Lj1g3v4327760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4327760.1 tr|Q9SL28|Q9SL28_ARATH Cysteine/histidine-rich C1
domain-containing protein OS=Arabidopsis thaliana
,32.24,3e-18,NUCLEOREDOXIN,NULL; THIOREDOXIN,NULL; Cysteine-rich
domain,NULL; PHD zinc finger,Zinc finger, PHD-ty,CUFF.32266.1
         (418 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33060.1                                                       285   7e-77
Glyma03g30160.1                                                       180   3e-45
Glyma20g00880.1                                                        57   3e-08
Glyma07g19730.1                                                        57   4e-08

>Glyma19g33060.1 
          Length = 385

 Score =  285 bits (729), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 183/412 (44%), Positives = 232/412 (56%), Gaps = 51/412 (12%)

Query: 1   MASAQKNQSSVSHFSHPHPLE-HXXXXXXXXXXXXCSGCKLRVTTNDNDYYRCSKTKTCN 59
           M S  K+  +V HFSHPHPL+              C GCKL+V   + DYY+C   KTC 
Sbjct: 1   MGSLHKD-PNVFHFSHPHPLDCTTPPSTENNNIVSCFGCKLKVKHGE-DYYQC---KTCA 55

Query: 60  FSLHSVCYNMPFITNHPSHPTHDXXXXXXXXXXXXXNT-----CFACKNHATGLTYHCAE 114
           FSLH VCY MP ITNHPSHP+HD              T     C AC NH TG  YHCAE
Sbjct: 56  FSLHHVCYKMPLITNHPSHPSHDLVLLAIPLSSSSPYTKATLNCVACGNHVTGFCYHCAE 115

Query: 115 CTIFFHXXXXXXXXXXAIKHHPHKIKLEFLPPYDFYCDFCNKPSF-SGWLYRCSMCEFDI 173
           C+IFFH           I  HPHKIKLEF PPYDF+CD CNKPS+ +GWLYRC+M    +
Sbjct: 116 CSIFFHSLCLALPLSLEITFHPHKIKLEFSPPYDFFCDLCNKPSYNNGWLYRCNMVSASV 175

Query: 174 HIACAVDNLEHHMDNYKIMRLVAEQVGGGISRTQFDNGITGAWDKKFYNQ-RKNRNMSSG 232
             +C           Y+IM LVA+Q+GGGI R   D  + G WDK+ Y+  RK  N +  
Sbjct: 176 GDSCK-------GYEYEIMSLVAQQIGGGI-RENSDGAVVG-WDKRLYSSPRKKHNKTGS 226

Query: 233 NIMKVV-ELELQETEQSSVFQETEESPVFALANFEEKTPLRDKLVPLSDFASPPTPSQSN 291
             MK++ ELELQE E          SP   L   EE+TPLRDKL PLSD +  P    SN
Sbjct: 227 GKMKIISELELQEKEL---------SPAELLLKLEERTPLRDKLTPLSDHSETPF---SN 274

Query: 292 QFGESYFSIDLTKSYSNSTYDHRSQVPKE-GTEFVV-----PESIV----ERAEESYDVV 341
           Q+ +SYFSIDL KSYS + +  RSQVP+E G++ ++     PE ++     + EE + +V
Sbjct: 275 QYSDSYFSIDLAKSYS-THHGRRSQVPREVGSDQIIRAVTMPERVIVSNSGQREEPFGLV 333

Query: 342 KWSSNSSCNSHQHLNKLHEAFF--KGGLVSDYGESRHME--VMKNSKESLAK 389
            W  N S +  Q  NK++ A F  K G  +D+G+S   +  V KN  +++AK
Sbjct: 334 YWPFNDSYHVGQQ-NKVNNAAFYIKEGPTTDFGKSTSSQRIVKKNPNQNIAK 384


>Glyma03g30160.1 
          Length = 173

 Score =  180 bits (456), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/178 (54%), Positives = 110/178 (61%), Gaps = 8/178 (4%)

Query: 1   MASAQKNQSSVSHFSHPHPLEHXXXXXXXXXXXXCSGCKLRVTTNDNDYYRCSKTKTCNF 60
           M SA K+ + V HFSHPHPLE             C GCKL+V   + DYY C   KTC F
Sbjct: 1   MGSAHKDPN-VFHFSHPHPLECTTPPSTGNNVIICFGCKLKVKHGE-DYYEC---KTCAF 55

Query: 61  SLHSVCYNMPFITNHPSHPTHDXXXXXXXXXXXXXNTCFACKNHATGLTYHCAECTIFFH 120
           SLH+VCY MP ITNHPSH +H+             N C AC NH TG  YHCAEC+IFFH
Sbjct: 56  SLHNVCYKMPLITNHPSHASHNLVLLAIPSTKATLN-CVACGNHVTGFCYHCAECSIFFH 114

Query: 121 XXXXXXXXXXAIKHHPHKIKLEFLPPYDFYCDFCNKPSF--SGWLYRCSMCEFDIHIA 176
                     AI +HPHKIKLEF  PY F+CD CNKPS+  +GWLYRC+MCEFD HIA
Sbjct: 115 SLCLALPVSLAITYHPHKIKLEFSAPYHFFCDLCNKPSYNNNGWLYRCNMCEFDTHIA 172


>Glyma20g00880.1 
          Length = 261

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 63/175 (36%), Gaps = 19/175 (10%)

Query: 11  VSHFSHPHPLEHXXXXXXXXXXXXCSGCKLRVTTNDNDYYRCSKTKTCNFSLHSVC-YNM 69
           + HFSHP   +H            C GCK          + C +   C+F LH  C    
Sbjct: 27  ILHFSHP---QHPLSMVDLPDLFNCVGCK---EYGSGKRFVCQQ---CDFQLHDFCALAP 77

Query: 70  PFITNHPSHPTHDXXXXXXXXXXXXXNT-CFACKNHATGLTYHCAECTIFFHXXXXXXXX 128
           P +  HP H  H               + C  C     G  + C  C    H        
Sbjct: 78  PALKAHPFHSQHSVLFHSKPVKSGMAKSKCDVCGKPTKGFGFLCTACAFQMHPCCAMLNN 137

Query: 129 XXAIKHHPHKIKLEFLP-----PYDFYCDFCNKPSFSGWLYRCSMCEFDIHIACA 178
                 HPH +++  LP     P  F C  C K   SG +YRC++CE+ +H  CA
Sbjct: 138 EIEYPAHPHTLRM--LPTTVPDPASFVCGECKK-QRSGKVYRCTVCEYHLHAVCA 189


>Glyma07g19730.1 
          Length = 300

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 63/178 (35%), Gaps = 22/178 (12%)

Query: 11  VSHFSHPHPLEHXXXXXXXXXXXXCSGCKLRVTTNDNDYYRCSKTKTCNFSLHSVC-YNM 69
           + HFSHP   +H            C GCK          + C +   C+F LH  C    
Sbjct: 63  ILHFSHP---QHPLSMVDLPDLFNCVGCK---EYGSGKRFVCQQ---CDFQLHDFCALAP 113

Query: 70  PFITNHPSHPTHDXXXXXXXXXXXXXNT-CFACKNHATGLTYHCAECTIFFHXXXXXXXX 128
           P +  HP H  H               + C  C     G  + C  C    H        
Sbjct: 114 PALKAHPFHSQHSVLFHSKPAKTGMAKSKCDVCGKPTKGFAFLCTACAFQMHPCCAMLNT 173

Query: 129 XXAIKHHPHKIKLEFLP--------PYDFYCDFCNKPSFSGWLYRCSMCEFDIHIACA 178
                 HPH +K+  LP        P  F C  C K   SG +YRC++C++ +H  CA
Sbjct: 174 EIEYPPHPHTLKM--LPTTSSTAPDPASFVCGECKK-RRSGKVYRCTVCKYHLHAVCA 228