Miyakogusa Predicted Gene

Lj1g3v4317700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4317700.1 Non Chatacterized Hit- tr|I1L2M1|I1L2M1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.06,0.00000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.32262.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30100.1                                                       166   1e-41
Glyma19g32970.1                                                       162   9e-41
Glyma09g17100.1                                                        62   2e-10

>Glyma03g30100.1 
          Length = 136

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 101/125 (80%), Gaps = 6/125 (4%)

Query: 22  KVQHVTKKSSDELLRKFAEADSDGSGQKKDLLRVAKRQKKMKRDHQCDNSSS---TAVVE 78
           KVQHVTKKSSDELLRKFAEA SD +  +    +  KR+ ++    +CD+ SS    A+VE
Sbjct: 15  KVQHVTKKSSDELLRKFAEAGSDEAAGENKRRKKKKRESELC---ECDSPSSNGGAAMVE 71

Query: 79  RRSLLPPVVTRRSVLLRQLRARDVRNRSSLLGTIHKTWRRTVEGASRVFMEKHYHRHKRL 138
           RRSLL P VTRRSVLLRQLR RDVRN+SSL GTIHKTWRRTVEGASRVF+EKHYHRHKRL
Sbjct: 72  RRSLLLPKVTRRSVLLRQLRVRDVRNKSSLFGTIHKTWRRTVEGASRVFLEKHYHRHKRL 131

Query: 139 INDLV 143
           IND+V
Sbjct: 132 INDIV 136


>Glyma19g32970.1 
          Length = 128

 Score =  162 bits (411), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 92/128 (71%), Positives = 103/128 (80%), Gaps = 11/128 (8%)

Query: 20  DAKVQHVTKKSSDELLRKFAEADSDGSGQKKDLLRVAKRQKKMKRDHQCDNSS----STA 75
           +AKVQHVT+KSSDELLRKFAEA S+ +G+ K       R+KK KR+ +CD  S      A
Sbjct: 8   EAKVQHVTRKSSDELLRKFAEAGSNEAGKNK-------RRKKKKRESECDCDSPMNGGAA 60

Query: 76  VVERRSLLPPVVTRRSVLLRQLRARDVRNRSSLLGTIHKTWRRTVEGASRVFMEKHYHRH 135
           VVERRSLLPP VTRRSVLLRQLR RDVRN+SSL GTIHKTWR TVE ASRVF+EKHYHRH
Sbjct: 61  VVERRSLLPPKVTRRSVLLRQLRVRDVRNKSSLFGTIHKTWRITVESASRVFLEKHYHRH 120

Query: 136 KRLINDLV 143
           KRLIND+V
Sbjct: 121 KRLINDIV 128


>Glyma09g17100.1 
          Length = 86

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 53/94 (56%), Gaps = 22/94 (23%)

Query: 23  VQHVTKKSSDELLRKFAEADSDGSGQKKDLLRVAKRQKKMKRDHQCDNSSSTAVVERRSL 82
           VQHVTKKSSDELLRKFAE     +  KK         KK KR    ++ S TAVVERRSL
Sbjct: 8   VQHVTKKSSDELLRKFAEVGDSNNAPKK---------KKTKR--TAEDGSGTAVVERRSL 56

Query: 83  LPPVVTRRSVLLRQLRARDVRN--RSSLLGTIHK 114
           L         L   LRARD+ +    SLLGTI K
Sbjct: 57  L---------LRAHLRARDLTHFRTKSLLGTIEK 81