Miyakogusa Predicted Gene

Lj1g3v4317580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4317580.1 tr|C1E1S5|C1E1S5_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_56977
,28.57,8e-19,seg,NULL; Nse4,Nse4; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Nse4,CUFF.32253.1
         (314 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30010.1                                                       409   e-114
Glyma10g44310.1                                                       267   1e-71
Glyma20g39130.1                                                       262   4e-70

>Glyma03g30010.1 
          Length = 342

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/288 (68%), Positives = 234/288 (81%), Gaps = 1/288 (0%)

Query: 27  HQTRHARRGLRSSYLAIKNRIHDEKDEIASPESKKFDLIFGEMESLHQLVTKPREQVADA 86
           HQT   RRG+RS YL++KN IHDE++EIA  +S KF+LIF EME+LHQLVTKPREQVADA
Sbjct: 28  HQTPKGRRGIRSRYLSVKNMIHDEREEIARADSHKFNLIFNEMETLHQLVTKPREQVADA 87

Query: 87  QALLDITKSLVVTARAHGGGGLTPSSFVAHMLKEFGGKGGGATTSTEDCSRNLIAWKDIG 146
           +ALLDIT+SLV++ +    GGLTPS FV H+LK+FGG+ G  + STED SRN +AWKDIG
Sbjct: 88  KALLDITQSLVMSVKNIAIGGLTPSDFVTHILKKFGGQAG-PSNSTEDFSRNSVAWKDIG 146

Query: 147 VAVSYVFGGGYGCSTMIGPIDAXXXXXXXXXXXXXXXSIELARPEELGGGISEEKTDTDK 206
           VAVS VF  G GC TMIG +DA                 ELARP+ELGGG  EE+T+TDK
Sbjct: 147 VAVSRVFRAGCGCYTMIGAMDAKIKQRKVYNRRKRVRPTELARPKELGGGSGEERTETDK 206

Query: 207 NMLTMFNILKKNRVVRLENLVLNRNSFAQTVENLFALSFLVKDGRAEIRVNEAGQQLVLP 266
           +M+TMFNIL+ N+ V+LENL+LNRNSFAQTVENLFALSFLV+DGRAEI+VNEAG  LV P
Sbjct: 207 HMITMFNILRINKFVKLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWLLVSP 266

Query: 267 RNAPAANAVLTKDVAFSHFVFRFDFNDWKLMVSTVGVGEELMPDRNSQ 314
           RNAPAAN+V+++DVAFSHFVFRFDFNDWKLMV +VGVGEELMP R+SQ
Sbjct: 267 RNAPAANSVVSRDVAFSHFVFRFDFNDWKLMVCSVGVGEELMPHRDSQ 314


>Glyma10g44310.1 
          Length = 363

 Score =  267 bits (682), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 136/289 (47%), Positives = 188/289 (65%), Gaps = 13/289 (4%)

Query: 24  ADYHQTRHARRGLRSSYLAIKNRIHDEKDEIASPESKKFDLIFGEMESLHQLVTKPREQV 83
           A   Q    RR +RS +L +KN I++++D++ + ES KFD I  E + LH  V KPREQV
Sbjct: 18  AASEQNPATRRVIRSQFLQLKNLINEKRDDLMNTESDKFDTILDEFDKLHVQVEKPREQV 77

Query: 84  ADAQALLDITKSLVVTARAHGGGGLTPSSFVAHMLKEFGGKGGGATTSTEDCSRNLIAWK 143
           ADA+ALLD+T++LV + ++    G+TPS FV+ +L  +              +++ I W 
Sbjct: 78  ADAEALLDLTRTLVGSVKSLANEGVTPSQFVSSLLIRYAH------------TQHSIDWH 125

Query: 144 DIGVAVSYVFGGGYGCSTMIGPIDAXXXXXXX-XXXXXXXXSIELARPEELGGGISEEKT 202
            +G+A S +F   +G STM+GP+D                  I   RP++L   ++EEKT
Sbjct: 126 KLGLAASPIFLSVHGSSTMLGPMDNQFKQRKMGVRRNRDPRQIATTRPQQLDEAVTEEKT 185

Query: 203 DTDKNMLTMFNILKKNRVVRLENLVLNRNSFAQTVENLFALSFLVKDGRAEIRVNEAGQQ 262
           DTDKNM TMF+IL++ + V LENL+LNR SFAQ+VENLFALSFLVKDGRAEI ++E    
Sbjct: 186 DTDKNMATMFHILRRTKRVPLENLILNRESFAQSVENLFALSFLVKDGRAEISLDENRLH 245

Query: 263 LVLPRNAPAANAVLTKDVAFSHFVFRFDFNDWKLMVSTVGVGEELMPDR 311
            V P+NAPAAN V +K+V+++HFVFR+D+ DWKLM   V  G+ELMP R
Sbjct: 246 YVSPKNAPAANLVSSKEVSYTHFVFRYDYQDWKLMKDVVPDGKELMPQR 294


>Glyma20g39130.1 
          Length = 356

 Score =  262 bits (669), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 134/285 (47%), Positives = 185/285 (64%), Gaps = 13/285 (4%)

Query: 28  QTRHARRGLRSSYLAIKNRIHDEKDEIASPESKKFDLIFGEMESLHQLVTKPREQVADAQ 87
           Q    RR +RS +L +KN I++++D++ + ES KFD I  E + LH  V KPREQVADA+
Sbjct: 15  QNPATRRVIRSQFLQLKNFINEKRDDLMNTESDKFDTILDEFDKLHVQVEKPREQVADAE 74

Query: 88  ALLDITKSLVVTARAHGGGGLTPSSFVAHMLKEFGGKGGGATTSTEDCSRNLIAWKDIGV 147
           ALLD+T++LV + ++    G+TPS FV+ +L  +              +++ I W  +G+
Sbjct: 75  ALLDLTRTLVGSVKSLTNEGVTPSQFVSSLLIRYAH------------AQHSIDWHQLGL 122

Query: 148 AVSYVFGGGYGCSTMIGPIDAXXXXXXX-XXXXXXXXSIELARPEELGGGISEEKTDTDK 206
           A S +F   +G STM+GP+D                  I   RP ++   ++EE TDTDK
Sbjct: 123 AASPIFLSFHGSSTMLGPMDNQFKQRKTGVPRNCNPRQIATTRPLQVDEAVTEENTDTDK 182

Query: 207 NMLTMFNILKKNRVVRLENLVLNRNSFAQTVENLFALSFLVKDGRAEIRVNEAGQQLVLP 266
           NM TMF+IL++ + V LENL+LNR SFAQTVENLFALSFLVKDGRAEI ++E     V P
Sbjct: 183 NMATMFHILRRTKRVPLENLILNRESFAQTVENLFALSFLVKDGRAEISLDENRLHYVSP 242

Query: 267 RNAPAANAVLTKDVAFSHFVFRFDFNDWKLMVSTVGVGEELMPDR 311
           +NAPAAN V +K+V+++HFVFR+D+ DWKLM   V  G+ELMP R
Sbjct: 243 KNAPAANLVSSKEVSYTHFVFRYDYQDWKLMKDVVPDGKELMPRR 287