Miyakogusa Predicted Gene

Lj1g3v4317460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4317460.1 tr|B9ICJ5|B9ICJ5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_575564 PE=4
SV=1,37.5,2e-16,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; seg,,CUFF.32245.1
         (579 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g32820.1                                                       573   e-163
Glyma14g05540.1                                                       335   9e-92
Glyma03g29920.1                                                       225   1e-58
Glyma07g14330.1                                                       154   2e-37
Glyma03g26720.1                                                        88   3e-17
Glyma04g40660.1                                                        53   1e-06

>Glyma19g32820.1 
          Length = 510

 Score =  573 bits (1478), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 290/513 (56%), Positives = 370/513 (72%), Gaps = 13/513 (2%)

Query: 75  MCKNSPFFLQDLLKKTQIH------NKHKXXXXXXXXXXXXXXKHSISRYLRYHPINEFE 128
           MC+NSP FL DLL K+Q        + +               K SISRYLRYHPINEFE
Sbjct: 1   MCRNSPSFLHDLLAKSQSQTLTRHVDNNNNNNSSSSSSTTTTTKRSISRYLRYHPINEFE 60

Query: 129 PFFESVGLKPSEYASLLPRDMMFLNDDALLMENYQTLCNFGVQRTKVGRIFKRAPEVFRY 188
           PFFES GL P EYA  LPRDM++LNDDALLMENY  LCN+GV RTK+GR+FK  P++FRY
Sbjct: 61  PFFESAGLTPPEYAPFLPRDMIYLNDDALLMENYHALCNYGVPRTKMGRLFKLTPQLFRY 120

Query: 189 ESGVLSLKLKAYEELGVAASTLVDAVAASPSLLVGDVDLDFVKVVEKLKEHFVAKGGGWV 248
           + GVL  KL+ YE+LGVA  TL   VA+SP +LVG VD+ FVKVVEKLK   V K   W+
Sbjct: 121 KPGVLISKLRDYEKLGVARRTLACVVASSPCILVGGVDVGFVKVVEKLK-GVVGKDVDWI 179

Query: 249 EEHFLD---GGVYCNWGMVLRLLCLLSEVGFSEGQIDELIRDRPCVVFQESGGRALSLIA 305
            E+ LD       C+W +VL +LCLL  V +SE Q+ +     P VVF++SGG  LSLI 
Sbjct: 180 GENLLDMLSDQGCCDWRIVLHVLCLLDRV-YSEEQLGDFFIRHPSVVFEDSGGSVLSLIN 238

Query: 306 FLSKFGLAVDRIALMFLEFPQIRIDKFYTNLRRCLQFLTEIEMQGEEIGSIFQSHTLLLG 365
           FL KFGL++D+++LM LEFP+IR+ KF +NLR+C  FLTEIEM+  EIG I QS  L+LG
Sbjct: 239 FLFKFGLSLDQVSLMLLEFPKIRVTKFLSNLRQCFLFLTEIEMEALEIGEILQSQCLVLG 298

Query: 366 SFTMKKTKSLLVDMNVGRKRLCRMVQDNPQEMKNWAMGIRVQPMVSVKAEQQTMLRKTEF 425
           SFT+KKT +LL ++N G+KRLCR+V+D+P  MK+WA+G R+QP V+   E ++  +K +F
Sbjct: 299 SFTLKKTITLLTNLNAGKKRLCRVVRDDPLVMKSWALGRRIQPFVNSYLEYESKEQKKKF 358

Query: 426 LVRWGFVENENSENLKEAFKLFRGRGTELQERFDLIVNAGVDSEDVRKMLRVSPQIINQS 485
           +++ G+V  ENS+ + E  +LFRG+G EL+ER D IV AG+D E V KM+R SP+I+NQ+
Sbjct: 359 MLKLGYV--ENSKKMNETIRLFRGKGAELEERLDFIVKAGLDYEVVCKMIRDSPRILNQT 416

Query: 486 IDRIKMKMEYLVKEGYSISDLVTFPSFLSYTPSRVKLRLSMNNWLKDQGVADAGLALSTT 545
            DRI MK+E LV  GYSISDL +FPSFLSY+P RVKLR  M +WLK+ G  +AGLALST 
Sbjct: 417 TDRINMKIENLVSLGYSISDLASFPSFLSYSPRRVKLRFLMYDWLKEHGAVEAGLALSTI 476

Query: 546 IACTERIFIQQYVKRHPSGLQVWQKLKKEILSE 578
           IAC+++ F + YVKRHPSGLQVWQ LK +I S+
Sbjct: 477 IACSDKAFEKLYVKRHPSGLQVWQDLKAQISSK 509


>Glyma14g05540.1 
          Length = 512

 Score =  335 bits (859), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 187/513 (36%), Positives = 303/513 (59%), Gaps = 22/513 (4%)

Query: 52  EAQAALLEYLHSTRSLQFSDADNMCKNSPFFLQDLLKKTQIHNKHKXXXXXXXXXXXXXX 111
           EAQ AL++Y+HSTR   FSDA+ + +NSP F++ L+  + I +K                
Sbjct: 18  EAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLV--SMIDDKDDVL------------ 63

Query: 112 KHSISRYLRYHPINEFEPFFESVGLKPSEYASLLPRDMMFLNDDALLMENYQTLCNFGVQ 171
             S+ R+LRY+PINEFEPFFES+G+ PSE    LP  M FL DD +L++N+  LCN+GV 
Sbjct: 64  -RSLERFLRYNPINEFEPFFESLGIDPSELYLFLPHGMFFLADDHVLLQNFHALCNYGVP 122

Query: 172 RTKVGRIFKRAPEVFRYESGVLSLKLKAYEELGVAASTLVDAVAASPSLLVGDVDLDFVK 231
           R ++G+ FK A E+F Y SGVL  KL+AYE LG+  ST+V  V   P LLVGDV+ +FV 
Sbjct: 123 RNRMGKFFKEAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVS 182

Query: 232 VVEKLKEHFVAKGGGWVEEHFLDGGVYCNWGMVLRLLCLLSEVGFSEGQIDELIRDRPCV 291
           V++ LK   +     W+  +      Y +W  +L  +  L +VG+SE Q+  L R+ P +
Sbjct: 183 VLDWLKR--IGIESDWMVNYLSCSRTY-SWKRMLDAMLFLHKVGYSEEQMHNLFRENPKL 239

Query: 292 VFQESGGRALSLIAFLSKFGLAVDRIALMFLEFPQIRIDKFYTNLRRCLQFLTEIEMQGE 351
           + +  G +   +   L K G+ ++ +   F+E+P I ++K   ++ R + FL  I M  +
Sbjct: 240 LLEGFGRKVYLVFGRLLKVGVEMNVVYSYFVEYPNILLNKCANDMLRVIDFLGAIGMGKD 299

Query: 352 EIGSIFQSHTLLLGSFTMKKTKSLLVDMNVGRKRLCRMVQDNPQEMKNWAMGIRVQPMVS 411
           +I  I   +  LL + ++K  K++  ++ VG+  L ++++D+P ++ + A     +    
Sbjct: 300 DITHILSKYMHLLITRSLKGHKTVCQELKVGKADLYQIIKDDPLKLISLASKQEQKGNGK 359

Query: 412 VKA-EQQTMLRKTEFLVRWGFVENENSENLKEAFKLFRGRGTELQERFDLIVNAGVDSED 470
           V + + +  L KT FL++ G++  ENSE + +A K+FRGRG +LQERFD +V AG+D   
Sbjct: 360 VDSHDPRNYLEKTTFLLKLGYI--ENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNS 417

Query: 471 VRKMLRVSPQIINQSIDRIKMKMEYLVKE-GYSISDLVTFPSFLSYTPSRVKLRLSMNNW 529
           V +M++ +P I++Q+   I+ K+++L     Y +  LV FP++  +   ++  RLSM  W
Sbjct: 418 VIEMIKRAPMILSQNKAVIQKKIDFLKNVLDYPLEGLVGFPTYFCHDLDKIVERLSMYAW 477

Query: 530 LKDQGVADAGLALSTTIACTERIFIQQYVKRHP 562
           LK++   +  L LST IA  ++ F++ +V  HP
Sbjct: 478 LKERNAVNPTLTLSTIIASNDKRFVKYFVNVHP 510


>Glyma03g29920.1 
          Length = 334

 Score =  225 bits (573), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/341 (41%), Positives = 187/341 (54%), Gaps = 81/341 (23%)

Query: 131 FESVGLKPSEYASLLPRDMMF-----------------------LNDDALLMENYQTLCN 167
           F+S   +PSE AS++  D M                        LND+ LLMENY+TLCN
Sbjct: 48  FQSTKKRPSESASIVDADNMCRNSPSFLHGLLDTTIARWPHTSRLNDEVLLMENYRTLCN 107

Query: 168 FGVQRTKVGRIFKRAPEVFRYESGVLSLKLKAYEELGVAASTLVDAVAASPSLLVGDVDL 227
           +G                                  GVA   L   +A+SP +LVG VDL
Sbjct: 108 YG---------------------------------RGVAPRMLTCVIASSPCILVGGVDL 134

Query: 228 DFVKVVEKLKEHFVAKGGGWVEEHFLDGGVYCNWGMVLRLLCLLSEVGFSEGQIDELIRD 287
           DFV+VVEKLK   V K G  +     D G  CNW +VL +LCLL+               
Sbjct: 135 DFVRVVEKLKG-VVGKDGENLLNVLDDQGC-CNWRIVLHVLCLLA--------------- 177

Query: 288 RPCVVFQESGGRALSLIAFLSKFGLAVDRIALMFLEFPQIRIDKFYTNLRRCLQFLTEIE 347
                 +ESGG  LSLI FL KFGL+VDR+AL+ LEFP+IR+ KF +NLR+C  FLT IE
Sbjct: 178 ------RESGGSVLSLINFLFKFGLSVDRVALVLLEFPEIRVAKFLSNLRQCFLFLTMIE 231

Query: 348 MQGEEIGSIFQSHTLLLGSFTMKKTKSLLVDMNVGRKRLCRMVQDNPQEMKNWAMGIRVQ 407
           M+  EIG I QSH L+LGSFT KKT +LL ++NVG+K+L R+V+D+P  M++ A+G R+Q
Sbjct: 232 MEASEIGRILQSHCLVLGSFTFKKTNTLLTNLNVGKKQLYRVVRDDPLVMESRALGRRIQ 291

Query: 408 PMVSVKAEQQTMLRKTEFLVRWGFVENENSENLKEAFKLFR 448
           P  +   E +   +K +F+++ G+V  ENS  + EA +  R
Sbjct: 292 PFRNSYLEYELKDQKKKFMLKLGYV--ENSRKMNEAIRSMR 330


>Glyma07g14330.1 
          Length = 560

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 250/554 (45%), Gaps = 60/554 (10%)

Query: 45  FPKSIVKEAQAALLEYLHSTRSLQFSDADNMCKNSPFFLQDLLKKTQIHNKHKXXXXXXX 104
           + K  + + Q +L +YLH+TR + ++ AD + KN           +              
Sbjct: 26  YKKFAIAQGQKSLTDYLHATRCIPYAYADKIAKN-----------SLTSLTTLITTTLGG 74

Query: 105 XXXXXXXKHSISRYLRYHPINEFEPFFESVGLKPSEYASLLPRDMMFLNDDALLMENYQT 164
                   H+++++LRYHPINEFE FFES+G+ PS+  SLLP+D  F ++D  L+   + 
Sbjct: 75  SFSPPHFPHNLNKFLRYHPINEFEFFFESIGIHPSKLGSLLPQDNFFFSEDDTLLNAARV 134

Query: 165 LCNFGVQRTKVGRIFKRAPEVFRYESGVLSLKLKAYEELGVAASTLVDAVAASPSLLVGD 224
           L  FG    ++G ++  +   F+  +  L  +L  ++  G   + +V    A P +  G 
Sbjct: 135 LHEFGFPWDRLGILYVESGCFFKCGASELKGRLCGFKRYGFCNAQVVGICLAFPFVFDGQ 194

Query: 225 ---------VDLDFVKVVEKLKEHFVAKGGGWVEEHFLDGGVYCNWGMVLRLLCLLSEV- 274
                     DL  +     L E    KG   V++          W  V R + L  ++ 
Sbjct: 195 KGDEVEALFCDLGLLFGELGLAECVEGKGNNSVDD----------WIGVCRKIRLFYDLN 244

Query: 275 -GFSEGQIDELIRDRPCVVFQESGGRAL-SLIAFLSKFGLAVDRIALMFLEFPQIRIDKF 332
            G S  ++          V  E G   L     +   FG   + +A + ++  ++     
Sbjct: 245 GGRSLVELVGGNNGVGVGVILEHGEEELVQATEYFCSFGAKKEDVARLIVDGRELLELDL 304

Query: 333 YTNLRRCLQFLTEIEMQGEEIGSIFQSHTLLLGSFTMKKTKSLLVDMNV-----GRKR-- 385
            T +   ++ L    M  +++  + + +  +LG+  M    +++  + +     G+ +  
Sbjct: 305 KTRVVDVVKLLKYFGMSSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGLHEWFFGKIKDG 364

Query: 386 ----LCRMVQDNPQEMKNWAMGIRVQPMVSVKAEQQTM-----LRKTEFLVRWGFVENEN 436
               L   V   P E+++         +  +KA Q++      + K  FL   GF EN  
Sbjct: 365 NHCLLVSFVASYPNEVQDEGY------LGCLKAIQESRTPTHNISKLNFLHAIGFGENAL 418

Query: 437 SENLKEAFKLFRGRGTELQERFDLIVNAGVDSEDVRKMLRVSPQIINQSIDRIKMKMEYL 496
           + N+   +    G   ELQ+RFD ++  G++   V KM+ + P+I++Q+   ++ K+ + 
Sbjct: 419 TMNV---YAQMHGTSVELQKRFDCLLRLGIEFSKVCKMITIYPKILSQNPQNLEQKVNFF 475

Query: 497 VKE-GYSISDLVTFPSFLSYT-PSRVKLRLSMNNWLKDQGVADAGLALSTTIACTERIFI 554
            +E G+S+  LVTFP+FL +   +R+K R   + W+ ++G++    ++++ +A + + F+
Sbjct: 476 CQEMGHSLEHLVTFPAFLCFDLENRIKPRYRFHMWIMEKGLSSKKYSIASMVATSNKNFV 535

Query: 555 QQYVKRHPSGLQVW 568
            +  K HP+ L+ W
Sbjct: 536 ARAFKIHPAALKHW 549


>Glyma03g26720.1 
          Length = 469

 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 90/151 (59%), Gaps = 5/151 (3%)

Query: 420 LRKTEFLVRWGFVENENSENLKEAFKLFRGRGTELQERFDLIVNAGVDSEDVRKMLRVSP 479
           + K  FL   GF EN  + N+   +    G   +LQ+RF+ ++  G++   + KM+ + P
Sbjct: 310 ISKLNFLHAIGFGENALTMNV---YAQMHGTSGKLQKRFNCLLRLGIEFSKICKMITIHP 366

Query: 480 QIINQSIDRIKMKMEYLVKE-GYSISDLVTFPSFLSYT-PSRVKLRLSMNNWLKDQGVAD 537
           +I++Q+   ++ K+ +  +E GYS+  L+TFP+FL +   +R+K R   + W+ ++G++ 
Sbjct: 367 KILSQNPQNLEQKVNFFCQEMGYSLEHLITFPAFLCFDLENRIKPRYRFHMWIMEKGLSS 426

Query: 538 AGLALSTTIACTERIFIQQYVKRHPSGLQVW 568
              ++++ +A +++ F+ + +K HP+ L+ W
Sbjct: 427 KNYSITSMVATSDKNFVARALKIHPAALKHW 457



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 11/189 (5%)

Query: 45  FPKSIVKEAQAALLEYLHSTRSLQFSDADNMCKNSPFFLQDLLKKTQIHNKHKXXXXXXX 104
           + K  + + Q +L +YLH+TRS+ ++ A+ + KNS   L  L+      +          
Sbjct: 7   YKKFAISQGQKSLTDYLHATRSIPYAYANQIAKNSLTSLTTLITTLGTSS---------- 56

Query: 105 XXXXXXXKHSISRYLRYHPINEFEPFFESVGLKPSEYASLLPRDMMFLNDDALLMENYQT 164
                   H+++++L YHPINEFE FFES+G+ PS + SLLP+D  F + D  L+     
Sbjct: 57  -FSPLHFPHNLNKFLMYHPINEFEFFFESIGIHPSNFHSLLPQDKFFFSQDDTLLSAACV 115

Query: 165 LCNFGVQRTKVGRIFKRAPEVFRYESGVLSLKLKAYEELGVAASTLVDAVAASPSLLVGD 224
           L  FG    ++G ++  +     + +  L  ++  ++  G+    +V    A P +  G 
Sbjct: 116 LYEFGFPWDRLGVLYVESGCFLNWGASELKDRVCGFKRYGLCNEQVVGVCMAFPFVFDGQ 175

Query: 225 VDLDFVKVV 233
              D V+ +
Sbjct: 176 KGDDEVEAL 184


>Glyma04g40660.1 
          Length = 252

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 448 RGRGTELQERFDLIVNAGVDSEDVRKMLRVSPQIINQSIDRIKMKMEYLVKE-GYSISDL 506
           R     +Q+   L +N G   ED+  M +  PQI+  +   ++ KMEYL++E G  I +L
Sbjct: 130 RTNCGNMQKVISLFLNYGFSCEDIVAMSKKQPQILQYNHTSLEKKMEYLIEEMGRDIEEL 189

Query: 507 VTFPSFLSYT-PSRVKLRLSMNNWLKDQGVA 536
           + FP+FL Y    R+K R  +   ++ +G++
Sbjct: 190 LLFPAFLGYKLDDRIKHRFEVKKLVRGRGMS 220