Miyakogusa Predicted Gene

Lj1g3v4276570.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4276570.2 Non Chatacterized Hit- tr|G7KTK3|G7KTK3_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,75.99,0,no
description,Armadillo-like helical; seg,NULL; ARM
repeat,Armadillo-type fold,CUFF.32277.2
         (584 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g32360.1                                                       692   0.0  

>Glyma19g32360.1 
          Length = 1076

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/586 (65%), Positives = 431/586 (73%), Gaps = 65/586 (11%)

Query: 18  EQQELLLWKSDPQPESIVSVTLARAVTSLLTTRPTKLHDSISRLXXXXXX-XXXXXLEHS 76
           E +E LLWKS+PQ ESIVSV+LARA+TSLLT+RP KLHDSI RL            LE S
Sbjct: 2   EGEEELLWKSEPQRESIVSVSLARAITSLLTSRPKKLHDSIHRLSSHSRSHTSLASLEDS 61

Query: 77  LRFFHTFVTDAAAANNLTSLDQLLLPIIHSLLKSKDTKRGGQAMILLSWLFQDELLFVPV 136
           L FF +FVTD+   N  +SLD++LLP+I + LKSK    G QAMILLSWLFQDELLF PV
Sbjct: 62  LWFFLSFVTDSRTNN--SSLDEVLLPVIDNALKSK---HGDQAMILLSWLFQDELLFQPV 116

Query: 137 AEALAGIVARKR-DDRYVLFGWCLLVRSLVEYDSSVHQSMLAGIRERYGDLLKILSTRLP 195
           AEALA IV+RK   DRY+L GWCLL+R+LVE+++S HQSM  GIR RYGDLLKILST LP
Sbjct: 117 AEALASIVSRKHVHDRYLLLGWCLLLRNLVEFENSAHQSMFGGIRGRYGDLLKILSTCLP 176

Query: 196 DLAGIVSNESTLQDGFQLPSRLGVSAADCLLSISGALTKVAELDGKKSRLNTRAKDQAIA 255
           DLAGIVS  STLQDGF+LPSRLGVSAADC LS+SGALTKVAE   KKS+LNTRAKDQ I 
Sbjct: 177 DLAGIVSKGSTLQDGFELPSRLGVSAADCFLSLSGALTKVAE--SKKSKLNTRAKDQEIT 234

Query: 256 FVQSPSVEKKVKMGSKSLLMSKFERDYILWNHLDHLICLVQXXXXXXXXXXXXHAQGLEQ 315
           FVQSP+++KKV + SKSLLMSK ERDY LW+HLD +ICLVQ            HA+GL Q
Sbjct: 235 FVQSPTIDKKVNLESKSLLMSKIERDYTLWHHLDDIICLVQRLLSWSKKSRFLHAKGLGQ 294

Query: 316 VLKWLEEIKGHYGSLLPEA----DCNALKSGDLLLCSCWKHYSMLLHLEDHKFSQHYKEL 371
           VLKWLEEIK HYGS   EA    D N LK+GDLLL SCWKHYSMLLHLED KFSQHYKEL
Sbjct: 295 VLKWLEEIKDHYGSFQHEAALKTDSNVLKTGDLLLSSCWKHYSMLLHLEDKKFSQHYKEL 354

Query: 372 LDQYLSGIQYYMDNHAGGYTDNKDGGLETMKFFXXXXXXXXXXXDSKRFEGTVSEFGMNI 431
           L+QY+SGIQ                                      RFE  VSEFGMNI
Sbjct: 355 LNQYMSGIQ--------------------------------------RFESMVSEFGMNI 376

Query: 432 SRILVPQLNCSDEDVVVGVVSIFKAIILKPDYSEEDTLTDSRQANLVIPFLLHLLDEQDG 491
           S ILVPQLNC+DEDV+VGVVSIFKAIIL+PDYS+ED LTD+RQAN VIPFLLHLLDEQDG
Sbjct: 377 SCILVPQLNCTDEDVIVGVVSIFKAIILRPDYSQEDALTDNRQANSVIPFLLHLLDEQDG 436

Query: 492 PARAVVLLIAEYCSMSKDDKCLMEVLKRLASGNISQRRNALDVISEILNISSESQKLLPY 551
            A+AVV+LIAEYCSMS+ D+CLMEVLKRLASGNISQRRNA+DVISE+L+ISS+SQ L+P 
Sbjct: 437 TAKAVVMLIAEYCSMSEGDQCLMEVLKRLASGNISQRRNAMDVISEVLHISSKSQNLMPS 496

Query: 552 SAW--------------QDIANKXXXXXXXXXXXXREQTSKLLPLI 583
           SAW              QD+ANK            REQ SKLLP+I
Sbjct: 497 SAWYDCLCCYTVFFSCLQDMANKLLERLGDEETKIREQASKLLPMI 542