Miyakogusa Predicted Gene

Lj1g3v4226840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226840.1 Non Chatacterized Hit- tr|C5Z0B3|C5Z0B3_SORBI
Putative uncharacterized protein Sb09g024330 OS=Sorghu,46.77,4e-18,
,NODE_41354_length_990_cov_94.516159.path1.1
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g28920.1                                                       169   5e-43
Glyma19g31630.1                                                       168   1e-42

>Glyma03g28920.1 
          Length = 144

 Score =  169 bits (429), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 86/99 (86%), Positives = 87/99 (87%), Gaps = 1/99 (1%)

Query: 27  DVAETKIV-DRKGGENCPKGAPLEEISASGDVNMEVPITPDDVIRAGGFGARDDIGSFLP 85
           DVAETKI  D KGGENCPKG   EEI ASGDVNME  ITPDDVIRAGGFGARDDI SFLP
Sbjct: 46  DVAETKIAADWKGGENCPKGTRPEEIDASGDVNMEASITPDDVIRAGGFGARDDISSFLP 105

Query: 86  VASDSTDFEASIRDARDYEEPQGEVSRPGLGWTGTTKEE 124
           VASDSTDFEASIRDARDYEEPQG+VSRPGLGWTG TK E
Sbjct: 106 VASDSTDFEASIRDARDYEEPQGQVSRPGLGWTGATKGE 144


>Glyma19g31630.1 
          Length = 142

 Score =  168 bits (425), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 86/99 (86%), Positives = 87/99 (87%), Gaps = 1/99 (1%)

Query: 27  DVAETKIV-DRKGGENCPKGAPLEEISASGDVNMEVPITPDDVIRAGGFGARDDIGSFLP 85
           DVAETKI  D KGGENCPKG   EEI ASGDVNME  ITPDDVIRAGGFGARDDI SFLP
Sbjct: 44  DVAETKIAADWKGGENCPKGTRPEEIDASGDVNMEASITPDDVIRAGGFGARDDISSFLP 103

Query: 86  VASDSTDFEASIRDARDYEEPQGEVSRPGLGWTGTTKEE 124
           VASDSTDFEASIRDARDYEEPQG+VSRPGLGWTG TK E
Sbjct: 104 VASDSTDFEASIRDARDYEEPQGQVSRPGLGWTGATKGE 142