Miyakogusa Predicted Gene

Lj1g3v4226690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226690.1 tr|G2XMG9|G2XMG9_ORYBR Hypothetical_protein
OS=Oryza brachyantha GN=Ob12g0074O16_11 PE=4
SV=1,50.56,1e-18,seg,NULL,CUFF.32075.1
         (341 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g31570.1                                                       202   4e-52
Glyma03g28860.1                                                       199   3e-51
Glyma11g20890.2                                                        92   1e-18
Glyma11g20890.1                                                        92   1e-18
Glyma04g26020.1                                                        89   6e-18

>Glyma19g31570.1 
          Length = 326

 Score =  202 bits (515), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/335 (42%), Positives = 174/335 (51%), Gaps = 77/335 (22%)

Query: 1   MANFR-QQGHSRNQVXXXXXXXXXXXXXXKPPLPQSNLHSTVPSWEKKFCYSAG-IPWRK 58
           MAN+R QQG S +QV              KPPL     HSTVP+WE+KFC S G +PWRK
Sbjct: 1   MANWRKQQGESHHQVGQWRSSYNR-----KPPL-GDKWHSTVPAWERKFCTSIGSVPWRK 54

Query: 59  LIECKKYMDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGLPCGISLPDPDIYIDDVDWNS 118
           L+E KKYM L  +V++WDDSAGKEAFDNAK R+WA+ING+PC ISLPDP+IY D+VDWN+
Sbjct: 55  LVESKKYMHLFEHVVNWDDSAGKEAFDNAKMRYWAEINGVPCNISLPDPNIYTDEVDWNA 114

Query: 119 SVDPELILDLERERI-FSDDEKRGGAEVVIIGGNLLYNNQVLTPTGWGDDDAEAPKPVIL 177
            VDP+LILD+E E     ++E R   E+V+IGG L  N Q L  TGW DD A        
Sbjct: 115 IVDPQLILDMEMELAKVPNEELRNDHEIVMIGGALFLNEQQLPCTGWDDDYA-------- 166

Query: 178 GGSLLLNNQTLTPTGWGDDEAEAPKPSDPNSFAQGWDSNLHV-NGVNSWEQGYA------ 230
                               AEAP   +PNS  QGW +NL   NGV S +Q +A      
Sbjct: 167 --------------------AEAP---NPNSAVQGWAANLQANNGVESGQQNHAPAEHVE 203

Query: 231 ------------------------QNSQNDSQGWNQREQHYGGELQNKAKXXXXXXXXXX 266
                                   Q+ +NDS GWNQRE + GG   +K            
Sbjct: 204 EHFAPAEPAKEDFAPAEHAKGYEWQDWRNDSWGWNQRENNGGGGDLHKMG----RGRNGR 259

Query: 267 XXXXXXXXXXXXRKRENMSWSHSNTSA--AYHYGN 299
                       R+RENMSWS + T+    YH  N
Sbjct: 260 GYGNWGTWDGYNRRRENMSWSKTPTNGNNEYHVNN 294


>Glyma03g28860.1 
          Length = 346

 Score =  199 bits (507), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/348 (39%), Positives = 177/348 (50%), Gaps = 83/348 (23%)

Query: 1   MANFR-QQGHSRNQVXXXXXXXXXXXXXXKPPLPQSNLHSTVPSWEKKFCYSAG-IPWRK 58
           MAN R QQG   +QV              KPPL  +  HSTVP+WE+KFC S G +PWRK
Sbjct: 1   MANCRKQQGEGHHQVGHWRSSYNR-----KPPL-GNKWHSTVPAWERKFCTSIGSVPWRK 54

Query: 59  LIECKKYMDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGLPCGISLPDPDIYIDDVDWNS 118
           L+E KKYM L  +V++WDDSAGKEAFDNAK R+WA+ING+PC IS PDP+I+ID+VDWN+
Sbjct: 55  LVESKKYMHLFEHVVNWDDSAGKEAFDNAKTRYWAEINGVPCNISPPDPNIFIDEVDWNA 114

Query: 119 SVDPELILDLERE--RIFSDDEKRGGAEVVIIGGNLLYNNQVLTPTGWGDDDAEAPKPVI 176
           +VDP+LILD+E E  ++ +++ ++   E+V+IGG                          
Sbjct: 115 TVDPQLILDVETELAKVPNEELRKNDHEIVMIGG-------------------------- 148

Query: 177 LGGSLLLNNQTLTPTGWGDD-EAEAPKPSDPNSFAQGWDSNLHV-NGVNSWEQGYA---- 230
              +L LN Q L  TGW DD  AE PKP DPNS  QGW  NL   NGV S +  +A    
Sbjct: 149 ---ALFLNEQKLPCTGWDDDYAAEGPKPFDPNSAVQGWGENLQEHNGVESGKLNHAPAEH 205

Query: 231 ------------------------------------QNSQNDSQGWNQREQHYGGELQNK 254
                                               Q+ +NDS GWNQRE + GG   + 
Sbjct: 206 AGEHVAPAEPAKEDFSLAEPAKEDFSLAEHAKGHEWQDWRNDSWGWNQRENYGGGGGGDL 265

Query: 255 AKXXXXXXXXXXXXXXXXXXXXXXRKRENMSWSHSNTSAAYHYGNEYQ 302
            K                      R+  NMSW  S T +AY+  NEY 
Sbjct: 266 HKMGRGRNGGGGYGNWGTWDGYNRRRENNMSW--SKTPSAYNGNNEYH 311


>Glyma11g20890.2 
          Length = 290

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 55/79 (69%)

Query: 65  YMDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPEL 124
           ++  HSNV  W+DSA +EAF NAK  +WAKIN LPC ISLPDPD YI+ +DW+  +DP+L
Sbjct: 2   FVYCHSNVFDWNDSAAEEAFQNAKSHYWAKINSLPCDISLPDPDTYINQIDWSPYIDPDL 61

Query: 125 ILDLERERIFSDDEKRGGA 143
           I +++       DE++  A
Sbjct: 62  IKEIDGAFFIVPDEEQENA 80


>Glyma11g20890.1 
          Length = 300

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 55/79 (69%)

Query: 65  YMDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPEL 124
           ++  HSNV  W+DSA +EAF NAK  +WAKIN LPC ISLPDPD YI+ +DW+  +DP+L
Sbjct: 2   FVYCHSNVFDWNDSAAEEAFQNAKSHYWAKINSLPCDISLPDPDTYINQIDWSPYIDPDL 61

Query: 125 ILDLERERIFSDDEKRGGA 143
           I +++       DE++  A
Sbjct: 62  IKEIDGAFFIVPDEEQENA 80


>Glyma04g26020.1 
          Length = 195

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 54/79 (68%)

Query: 65  YMDLHSNVLHWDDSAGKEAFDNAKKRFWAKINGLPCGISLPDPDIYIDDVDWNSSVDPEL 124
           ++  HSNV  W+DSA +EA  NAK  +WAKIN LPC ISLPDPD Y D +DWN  +DP++
Sbjct: 2   FVYCHSNVFDWNDSAAEEALQNAKNHYWAKINSLPCDISLPDPDTYNDQIDWNPYIDPDM 61

Query: 125 ILDLERERIFSDDEKRGGA 143
           I ++++      DE++  A
Sbjct: 62  IKEIDKAFFTVPDEEQETA 80