Miyakogusa Predicted Gene

Lj1g3v4215510.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4215510.2 Non Chatacterized Hit- tr|I1N8W0|I1N8W0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,67.27,0.00000000007,
,CUFF.32088.2
         (62 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g31500.1                                                        71   2e-13
Glyma03g28760.1                                                        67   6e-12

>Glyma19g31500.1 
          Length = 152

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 41/55 (74%), Gaps = 6/55 (10%)

Query: 8  SQQHDDGAFYGNNVVGEDDVLDLLPDSFDLDAGEDLSVMEAQLEEFIRSCETQGK 62
          SQQHDDGAFYG +    +DV+DLLPDSFD DAGEDL       EEFIRS E+QGK
Sbjct: 49 SQQHDDGAFYGEDGFDGNDVVDLLPDSFDFDAGEDL------FEEFIRSSESQGK 97


>Glyma03g28760.1 
          Length = 100

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/56 (66%), Positives = 43/56 (76%), Gaps = 7/56 (12%)

Query: 8  SQQHDDGAFYG-NNVVGEDDVLDLLPDSFDLDAGEDLSVMEAQLEEFIRSCETQGK 62
          SQQHD+GAFYG ++    +DV+DLLPDSFDLDAGEDL       EEFIRS E+QGK
Sbjct: 49 SQQHDEGAFYGEDDGFDGNDVVDLLPDSFDLDAGEDL------FEEFIRSSESQGK 98