Miyakogusa Predicted Gene

Lj1g3v4144840.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4144840.3 Non Chatacterized Hit- tr|C6SWB5|C6SWB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53426 PE,52,1e-18,
,CUFF.32011.3
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g28380.1                                                       107   2e-24
Glyma19g31100.1                                                       100   3e-22

>Glyma03g28380.1 
          Length = 159

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/104 (54%), Positives = 74/104 (71%), Gaps = 8/104 (7%)

Query: 14  GTDEKKVNELNTILDKFYDDNIKDATINFPEFYRGVCEIVEELNEKRGNTQFKLPETEVL 73
           G D+KK+ EL  I+D+ Y++ +KDA   F EFY  VCEIVE+LNEK GNTQ KLPET+ +
Sbjct: 11  GADKKKLEELGPIIDEIYEEKVKDAK-KFSEFYHAVCEIVEQLNEKLGNTQIKLPETKAI 69

Query: 74  KKAYKYNENHKGKD----KALKKSEFKEIMKEMVKESGFTGIGA 113
           +K Y+     +G D    K L K+EF+EIM+ +VK SGFTGIGA
Sbjct: 70  EKEYR---KRRGDDDTNKKPLAKAEFQEIMQNLVKTSGFTGIGA 110


>Glyma19g31100.1 
          Length = 159

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 2/101 (1%)

Query: 14  GTDEKKVNELNTILDKFYDDNIKDATINFPEFYRGVCEIVEELNEKRGNTQFKLPETEVL 73
           G D+KK  EL  I+++ Y + +K+A   F EFY  VCEIVE+LNEK GNTQ KLPET+ +
Sbjct: 11  GADKKKHEELVPIIEEIYKEKVKNAK-EFSEFYHAVCEIVEQLNEKLGNTQIKLPETKAI 69

Query: 74  KKAYKYNENHKGKD-KALKKSEFKEIMKEMVKESGFTGIGA 113
           +K Y+        D K L K+EF+EIM+ +VK SGFTGIGA
Sbjct: 70  EKEYRKRRGDNDTDKKPLTKAEFQEIMQNLVKTSGFTGIGA 110