Miyakogusa Predicted Gene

Lj1g3v4139600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4139600.1 Non Chatacterized Hit- tr|D8U488|D8U488_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,34.1,3e-19,SPC25,Signal peptidase complex subunit 2; SUBFAMILY NOT
NAMED,NULL; MICROSOMAL SIGNAL PEPTIDASE 25 K,CUFF.31989.1
         (181 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g06720.1                                                       301   2e-82
Glyma02g42170.1                                                       300   5e-82

>Glyma14g06720.1 
          Length = 184

 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/184 (81%), Positives = 158/184 (85%), Gaps = 3/184 (1%)

Query: 1   MASKSPKKTNLLDHNSIKHILDESVSEIVKSNGYVEDVRLSNVRXXXXXXXXXXXXFSQF 60
           MASK PKK NLLDH+SIKHILDESVSE+V S GYVEDVRLSN R            F+QF
Sbjct: 1   MASKVPKKANLLDHHSIKHILDESVSEVVTSRGYVEDVRLSNARLFIGAIIIVIALFAQF 60

Query: 61  YKKKFPENKDFVLACIALYVIFNGLLQLIIYTKEKDAILFTYPPAGS--GTGLVVSSKLP 118
           YKKKFPEN+DF++ACIALYVIFNGLLQLIIYTKEK+AILFTYPP GS   TGLVVSSKLP
Sbjct: 61  YKKKFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLP 120

Query: 119 RFSDMYTLTIASAEPKSISTNEPVHFTKSVTQWFTNDGILVEGLFWKDVEALIAQYTK-P 177
           RFSDMYTLTIASA+PKSIS NEPVHFTKSVTQWFT DGILVEGLFWKDVEALI QYTK P
Sbjct: 121 RFSDMYTLTIASADPKSISANEPVHFTKSVTQWFTKDGILVEGLFWKDVEALIVQYTKEP 180

Query: 178 KKSK 181
           KK K
Sbjct: 181 KKGK 184


>Glyma02g42170.1 
          Length = 184

 Score =  300 bits (768), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/184 (80%), Positives = 160/184 (86%), Gaps = 3/184 (1%)

Query: 1   MASKSPKKTNLLDHNSIKHILDESVSEIVKSNGYVEDVRLSNVRXXXXXXXXXXXXFSQF 60
           MASK+PKK NLLDH+SIKHILDESVSE+V S G+VEDVRLSNVR            F+QF
Sbjct: 1   MASKAPKKANLLDHHSIKHILDESVSEVVTSRGFVEDVRLSNVRLLIGAIIIVIALFAQF 60

Query: 61  YKKKFPENKDFVLACIALYVIFNGLLQLIIYTKEKDAILFTYPPAGS--GTGLVVSSKLP 118
           YKKKFPEN+DF++ACIALYVIFNGLLQLIIYTKEK+AILFTYPP GS   TGLVVSSKLP
Sbjct: 61  YKKKFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLP 120

Query: 119 RFSDMYTLTIASAEPKSISTNEPVHFTKSVTQWFTNDGILVEGLFWKDVEALIAQYTK-P 177
           RFSDMYTLTIASA+PKSIS N+ VHFTKSVTQWFT DG+LVEGLFWKDVEALI QYTK P
Sbjct: 121 RFSDMYTLTIASADPKSISANDQVHFTKSVTQWFTKDGVLVEGLFWKDVEALIVQYTKEP 180

Query: 178 KKSK 181
           KKSK
Sbjct: 181 KKSK 184