Miyakogusa Predicted Gene

Lj1g3v4119290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4119290.1 tr|Q2HSY2|Q2HSY2_MEDTR Cyclin-like F-box
OS=Medicago truncatula GN=MTR_7g089670 PE=4 SV=1,45.45,2e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; F-box domain,F-box domain,
cyclin-like; FBOX,F-box ,CUFF.31961.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g28230.1                                                       124   2e-29
Glyma10g18630.1                                                       117   2e-27
Glyma19g31000.1                                                       103   4e-23
Glyma14g04080.1                                                        98   2e-21
Glyma07g36360.1                                                        97   3e-21
Glyma02g44660.1                                                        94   3e-20
Glyma02g44660.2                                                        94   3e-20
Glyma20g08260.1                                                        94   3e-20
Glyma03g28210.1                                                        87   3e-18
Glyma19g30990.1                                                        84   2e-17
Glyma03g28220.1                                                        79   9e-16

>Glyma03g28230.1 
          Length = 226

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 73/94 (77%), Gaps = 2/94 (2%)

Query: 11  ISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTF 70
           +SLLNLPE +LDCILK LSPMEL+ MSEVCTCLRD CRSD LWE H+K+KWG +IGD  +
Sbjct: 1   MSLLNLPEPILDCILKLLSPMELVSMSEVCTCLRDRCRSDPLWEVHIKKKWGGVIGDVAY 60

Query: 71  EEWQWHLTTIK-SGKTLLNQDIN-QNGSLGSFCD 102
           +EW WH+TT K  G   L+Q  N QNGSLG F +
Sbjct: 61  KEWHWHITTTKEKGINQLHQQHNIQNGSLGPFSE 94


>Glyma10g18630.1 
          Length = 297

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 68/100 (68%)

Query: 11  ISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTF 70
           +SLL+LPE  LD ILK  SP EL  +SEVC  L+D C+SDH WE+H+K KWGR+IGD  +
Sbjct: 1   VSLLDLPEPTLDLILKCFSPNELCTVSEVCVSLKDKCQSDHFWEHHIKHKWGRVIGDAVY 60

Query: 71  EEWQWHLTTIKSGKTLLNQDINQNGSLGSFCDSRPVLYFG 110
           +EW+WH+T  K G  L     NQ GS+G+F    P LY G
Sbjct: 61  KEWEWHITIAKEGSFLNQNTNNQTGSMGTFTGVWPNLYLG 100


>Glyma19g31000.1 
          Length = 199

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 65/100 (65%), Gaps = 1/100 (1%)

Query: 11  ISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTF 70
           +SL NL E VLDCILK LSPM LI+M EVCT  RD C SD LWE HMK+KWG +IGD  +
Sbjct: 3   VSLFNLQEPVLDCILKLLSPMGLIRMPEVCTFFRDRCGSDPLWEVHMKKKWGGVIGDVAY 62

Query: 71  EEWQWHLTTIK-SGKTLLNQDINQNGSLGSFCDSRPVLYF 109
           +EWQ H+T  K  G    NQ   QNGS+ S       LYF
Sbjct: 63  KEWQRHITKAKEKGINQSNQHNIQNGSVISRRFFMMTLYF 102


>Glyma14g04080.1 
          Length = 397

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 1   MENTEKRGNMISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQK 60
           +EN E   +M S+L+LPE VL+CIL++L P  L +M+ VC  LR++C SDHLWE HMKQK
Sbjct: 76  VENIEDSQDM-SVLDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSDHLWERHMKQK 134

Query: 61  WGRIIGDDTFEEWQWHLTTIKSGKTL 86
           WGRIIG   + EW+WH+ +  +  TL
Sbjct: 135 WGRIIGQAAYREWKWHVASKGNVGTL 160


>Glyma07g36360.1 
          Length = 399

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)

Query: 1   MENTEKRGNMISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQK 60
           +EN E   +M S+L+LPE  LDCIL+RL P  L +M+ VC  LR+ C SDHLWE HM+QK
Sbjct: 77  VENVEDSHDM-SVLDLPELALDCILERLPPSALCRMAAVCRSLRERCVSDHLWERHMRQK 135

Query: 61  WGRIIGDDTFEEWQWHLTTIKS 82
           WGR+IG   + EW+WH+ + ++
Sbjct: 136 WGRVIGPAAYREWKWHVASKRN 157


>Glyma02g44660.1 
          Length = 397

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 56/76 (73%)

Query: 11  ISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTF 70
           +S+L+LPE VL+CIL++L P  L +M+ VC  LR++C SDHLWE HMKQKWGR+IG   +
Sbjct: 85  MSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVIGQAAY 144

Query: 71  EEWQWHLTTIKSGKTL 86
            EW+WH  +  +  TL
Sbjct: 145 REWKWHAASKGNVGTL 160


>Glyma02g44660.2 
          Length = 344

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 56/76 (73%)

Query: 11  ISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTF 70
           +S+L+LPE VL+CIL++L P  L +M+ VC  LR++C SDHLWE HMKQKWGR+IG   +
Sbjct: 85  MSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVIGQAAY 144

Query: 71  EEWQWHLTTIKSGKTL 86
            EW+WH  +  +  TL
Sbjct: 145 REWKWHAASKGNVGTL 160


>Glyma20g08260.1 
          Length = 399

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 60/82 (73%), Gaps = 1/82 (1%)

Query: 1   MENTEKRGNMISLLNLPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQK 60
           +EN E+  +M S+L+LPE  LDCIL+RL P  L +++ VC  LR+ C SDHLWE HM++K
Sbjct: 77  VENVEESLDM-SVLDLPELALDCILERLPPSSLCRIAAVCRTLRERCVSDHLWEKHMRKK 135

Query: 61  WGRIIGDDTFEEWQWHLTTIKS 82
           WGR+IG   + EW+WH+ + ++
Sbjct: 136 WGRVIGPAAYREWKWHVASKRN 157


>Glyma03g28210.1 
          Length = 401

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 1/74 (1%)

Query: 22  DCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTFEEWQWHLTTIK 81
           +CIL+ LSP EL +++ VCT LRD CRSDHLW+ HM++KWG++ GD  + +W+WH+ +  
Sbjct: 100 ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDAAYRQWKWHVASKN 159

Query: 82  SGKTLLNQDINQNG 95
             K   NQ  NQ G
Sbjct: 160 REKISSNQH-NQKG 172


>Glyma19g30990.1 
          Length = 399

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 22  DCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTFEEWQWHLTTIK 81
           +CIL+ LSP EL +++ VCT LRD CRSDHLW+ HM++KWG++ GD  + +W+W + +  
Sbjct: 98  ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDAVYRQWKWQVASKT 157

Query: 82  SGKTLLNQDINQNG 95
             K   NQ  NQ G
Sbjct: 158 REKISSNQH-NQKG 170


>Glyma03g28220.1 
          Length = 257

 Score = 79.3 bits (194), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 11/85 (12%)

Query: 16  LPEHVLDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENHMKQKWGRIIGDDTFEEWQW 75
           LPE  LDCIL+ L P +L ++++VCT LRD  RSD LWE  +K KWGR++GD   +EW +
Sbjct: 1   LPEWTLDCILECLPPQDLCRVAQVCTSLRDRIRSDALWEKKIKHKWGRLLGDVAHQEWHF 60

Query: 76  HLTTIKSGKTLLNQDINQNGSLGSF 100
                     LL Q  NQ+GS GSF
Sbjct: 61  ---------LLLQQ--NQSGSYGSF 74