Miyakogusa Predicted Gene

Lj1g3v4118240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4118240.1 tr|Q2HSY4|Q2HSY4_MEDTR Cyclin-like F-box
OS=Medicago truncatula GN=MtrDRAFT_AC150889g18v2 PE=4
SV=1,37.82,6e-19,FBOX,F-box domain, cyclin-like; no description,NULL;
F-box,F-box domain, cyclin-like; A Receptor for,CUFF.31985.1
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g18630.1                                                       143   7e-35
Glyma03g28230.1                                                       138   3e-33
Glyma14g04080.1                                                       117   6e-27
Glyma02g44660.1                                                       117   8e-27
Glyma02g44660.2                                                       116   1e-26
Glyma20g08260.1                                                       107   7e-24
Glyma07g36360.1                                                       106   1e-23
Glyma03g28210.1                                                       104   4e-23
Glyma19g31000.1                                                       103   1e-22
Glyma19g30990.1                                                       102   2e-22
Glyma03g28220.1                                                        72   4e-13

>Glyma10g18630.1 
          Length = 297

 Score =  143 bits (361), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/160 (48%), Positives = 102/160 (63%), Gaps = 4/160 (2%)

Query: 11  ICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGEST 70
           + LL+LPE  LD ILK  SP EL  +SEVC  L+D C+SDH WE+ I  KWGR+I G++ 
Sbjct: 1   VSLLDLPEPTLDLILKCFSPNELCTVSEVCVSLKDKCQSDHFWEHHIKHKWGRVI-GDAV 59

Query: 71  FKEWQWHLT--KLNSIETLFNINLDWSLGSLCGSLHELCIGSYLEGCGHVQRFLSNNPMM 128
           +KEW+WH+T  K  S       N   S+G+  G    L +GSYLE C  +     NN +M
Sbjct: 60  YKEWEWHITIAKEGSFLNQNTNNQTGSMGTFTGVWPNLYLGSYLEDCKVLNGQRPNNFLM 119

Query: 129 GLYLSLDTGKFWFPAQVYCDCALVSNVLFSYDSNTDTFKA 168
            LY SL++G+FWFPAQVY    ++ N L SYDS ++TF+A
Sbjct: 120 SLYFSLESGRFWFPAQVY-KGLMLHNALVSYDSESNTFQA 158


>Glyma03g28230.1 
          Length = 226

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/141 (53%), Positives = 90/141 (63%), Gaps = 19/141 (13%)

Query: 11  ICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGEST 70
           + LLNLPE ILDCILK LSPMEL+ MSEVCTCLRD CRSD LWE  I +KWG +I G+  
Sbjct: 1   MSLLNLPEPILDCILKLLSPMELVSMSEVCTCLRDRCRSDPLWEVHIKKKWGGVI-GDVA 59

Query: 71  FKEWQWHLTK-----LNSIETLFNINLDWSLGSLCGSLHELCIGSYLEGCGHVQRFLSNN 125
           +KEW WH+T      +N +    NI          GSL     G + E C H+   L+N+
Sbjct: 60  YKEWHWHITTTKEKGINQLHQQHNIQ--------NGSL-----GPFSEDCSHLNTSLANS 106

Query: 126 PMMGLYLSLDTGKFWFPAQVY 146
            MM LY SL+ GKFWFPAQ+Y
Sbjct: 107 FMMALYFSLENGKFWFPAQIY 127


>Glyma14g04080.1 
          Length = 397

 Score =  117 bits (293), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 25/184 (13%)

Query: 1   MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQK 60
           +EN E     + +L+LPEL+L+CIL++L P  L +M+ VC  LR++C SDHLWE  + QK
Sbjct: 76  VENIED-SQDMSVLDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSDHLWERHMKQK 134

Query: 61  WGRIINGESTFKEWQWHLTKLNSIETLFN---------INLDWSLGSLCGSLHELCIGSY 111
           WGRII G++ ++EW+WH+    ++ TL +         ++L W    +   +        
Sbjct: 135 WGRII-GQAAYREWKWHVASKGNVGTLRHGKQRSLLRLVSLSWPFSWMRTKVDA------ 187

Query: 112 LEGCGHVQRFLSNNPMMGLYLSLDTGKFWFPAQVY-CDCALVSNVL------FSYDSNTD 164
                  Q +L  + +M  YL+L+TG FWFPAQVY  +   V  +L       SYD + D
Sbjct: 188 -NNSIKQQSYLPPDSLMTWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHND 246

Query: 165 TFKA 168
           TF+A
Sbjct: 247 TFQA 250


>Glyma02g44660.1 
          Length = 397

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 24/176 (13%)

Query: 9   NSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGE 68
             + +L+LPEL+L+CIL++L P  L +M+ VC  LR++C SDHLWE  + QKWGR+I G+
Sbjct: 83  QDMSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVI-GQ 141

Query: 69  STFKEWQWHLTKLNSIETLFN---------INLDWSLGSLCGSLHELCIGSYLEGCGHVQ 119
           + ++EW+WH     ++ TL +         ++L W    +   +               Q
Sbjct: 142 AAYREWKWHAASKGNVGTLRHGKQRSLLRLVSLSWPFSWMRTKVDA-------NNSIKQQ 194

Query: 120 RFLSNNPMMGLYLSLDTGKFWFPAQVY-CDCALVSNVL------FSYDSNTDTFKA 168
            +L  + +M  YL+L+TG FWFPAQVY  +   V  +L       SYD +TDTF+A
Sbjct: 195 SYLPPDSLMTWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHTDTFQA 250


>Glyma02g44660.2 
          Length = 344

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 24/176 (13%)

Query: 9   NSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGE 68
             + +L+LPEL+L+CIL++L P  L +M+ VC  LR++C SDHLWE  + QKWGR+I G+
Sbjct: 83  QDMSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVI-GQ 141

Query: 69  STFKEWQWHLTKLNSIETLFN---------INLDWSLGSLCGSLHELCIGSYLEGCGHVQ 119
           + ++EW+WH     ++ TL +         ++L W    +   +               Q
Sbjct: 142 AAYREWKWHAASKGNVGTLRHGKQRSLLRLVSLSWPFSWMRTKVDA-------NNSIKQQ 194

Query: 120 RFLSNNPMMGLYLSLDTGKFWFPAQVY-CDCALVSNVL------FSYDSNTDTFKA 168
            +L  + +M  YL+L+TG FWFPAQVY  +   V  +L       SYD +TDTF+A
Sbjct: 195 SYLPPDSLMTWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHTDTFQA 250


>Glyma20g08260.1 
          Length = 399

 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 24/184 (13%)

Query: 1   MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQK 60
           +EN E+  + + +L+LPEL LDCIL+RL P  L +++ VC  LR+ C SDHLWE  + +K
Sbjct: 77  VENVEESLD-MSVLDLPELALDCILERLPPSSLCRIAAVCRTLRERCVSDHLWEKHMRKK 135

Query: 61  WGRIINGESTFKEWQWHLTKLNSIETLFN---------INLDWSLGSLCGSLHELCIGSY 111
           WGR+I G + ++EW+WH+    ++  L +         ++L W    +   +        
Sbjct: 136 WGRVI-GPAAYREWKWHVASKRNVGGLKHGRQKGLMRFMSLHWPFQWIRPKVDANYNNPK 194

Query: 112 LEGCGHVQRFLSNNPMMGLYLSLDTGKFWFPAQVY-CDCALVSNVL------FSYDSNTD 164
           L         L  + +M  YL+L++G FWFPAQVY  +   V  +L       SYD  TD
Sbjct: 195 LRSS------LPVDSVMNWYLALESGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPRTD 248

Query: 165 TFKA 168
           TF+A
Sbjct: 249 TFQA 252


>Glyma07g36360.1 
          Length = 399

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 24/184 (13%)

Query: 1   MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQK 60
           +EN E   + + +L+LPEL LDCIL+RL P  L +M+ VC  LR+ C SDHLWE  + QK
Sbjct: 77  VENVED-SHDMSVLDLPELALDCILERLPPSALCRMAAVCRSLRERCVSDHLWERHMRQK 135

Query: 61  WGRIINGESTFKEWQWHLTKLNSIETLFN---------INLDWSLGSLCGSLHELCIGSY 111
           WGR+I G + ++EW+WH+    ++  L +         ++L W L  +     +    S 
Sbjct: 136 WGRVI-GPAAYREWKWHVASKRNVGGLKHGRQKGLMRFMSLRWPLQWIRPKA-DANNNSP 193

Query: 112 LEGCGHVQRFLSNNPMMGLYLSLDTGKFWFPAQVYCD-----CALVS--NVLFSYDSNTD 164
            +G       L  + +M  YL+L++G FWF AQVY         L+S  +   SYD  TD
Sbjct: 194 KQGSS-----LPVDSVMNWYLALESGNFWFLAQVYNRENGHIGFLLSCYDAELSYDPQTD 248

Query: 165 TFKA 168
           TF+A
Sbjct: 249 TFQA 252


>Glyma03g28210.1 
          Length = 401

 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 10/156 (6%)

Query: 22  DCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGESTFKEWQWHLTKL 81
           +CIL+ LSP EL +++ VCT LRD CRSDHLW+  + +KWG++  G++ +++W+WH+   
Sbjct: 100 ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVF-GDAAYRQWKWHVASK 158

Query: 82  NSIETLFNINLDWSLGSLC--GSLHELCIGSYLEGCGHVQRFLSNNPMMGLYLSLDTGKF 139
           N  +   N +    + +    G L  + I +  E        L  + +  LYLSL++GKF
Sbjct: 159 NREKISSNQHNQKGIFAFLRGGFLPFIWIKAKSEKGTESSSSLPEDSIAALYLSLESGKF 218

Query: 140 WFPAQVYCDCALVSNVLFS-------YDSNTDTFKA 168
           WFPAQVY      +  + S       YDS +DTF A
Sbjct: 219 WFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLA 254


>Glyma19g31000.1 
          Length = 199

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 76/137 (55%), Gaps = 22/137 (16%)

Query: 10  SICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGES 69
           ++ L NL E +LDCILK LSPM LI+M EVCT  RD C SD LWE  + +KWG +I G+ 
Sbjct: 2   NVSLFNLQEPVLDCILKLLSPMGLIRMPEVCTFFRDRCGSDPLWEVHMKKKWGGVI-GDV 60

Query: 70  TFKEWQWHLTKLNSIETLFNINLDWSLGSLCGSLHELCIGSYLEGCGHVQRFLSNNPMMG 129
            +KEWQ H+TK                G    + H +  GS +      +RF     MM 
Sbjct: 61  AYKEWQRHITKAK------------EKGINQSNQHNIQNGSVIS-----RRFF----MMT 99

Query: 130 LYLSLDTGKFWFPAQVY 146
           LY SL+ G FWFPAQ +
Sbjct: 100 LYFSLENGNFWFPAQTF 116


>Glyma19g30990.1 
          Length = 399

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 10/156 (6%)

Query: 22  DCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGESTFKEWQWHLTKL 81
           +CIL+ LSP EL +++ VCT LRD CRSDHLW+  + +KWG++  G++ +++W+W +   
Sbjct: 98  ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVF-GDAVYRQWKWQVASK 156

Query: 82  NSIETLFNINLDWSLGSLC--GSLHELCIGSYLEGCGHVQRFLSNNPMMGLYLSLDTGKF 139
              +   N +    + +    G L  L I +  E        LS + +  LYLSL++GKF
Sbjct: 157 TREKISSNQHNQKGIFAFLNGGFLPLLWIKAKSEKGTQSNSSLSEDSIAALYLSLESGKF 216

Query: 140 WFPAQVYCDCALVSNVLFS-------YDSNTDTFKA 168
           WFPAQVY      +  + S       YDS +DTF A
Sbjct: 217 WFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLA 252


>Glyma03g28220.1 
          Length = 257

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 3/106 (2%)

Query: 16  LPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGESTFKEWQ 75
           LPE  LDCIL+ L P +L ++++VCT LRD  RSD LWE  I  KWGR++ G+   +EW 
Sbjct: 1   LPEWTLDCILECLPPQDLCRVAQVCTSLRDRIRSDALWEKKIKHKWGRLL-GDVAHQEWH 59

Query: 76  WHLTKLNSIETL--FNINLDWSLGSLCGSLHELCIGSYLEGCGHVQ 119
           + L + N   +   F++ L      LC SL  +    +L  C  +Q
Sbjct: 60  FLLLQQNQSGSYGSFSVCLKIVQKWLCISLLRVAFFGFLFKCSRLQ 105