Miyakogusa Predicted Gene
- Lj1g3v4118230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4118230.1 tr|Q2HSX6|Q2HSX6_MEDTR Cyclin-like F-box
OS=Medicago truncatula GN=MTR_7g089730 PE=4
SV=1,73.21,9e-16,FBOX,F-box domain, cyclin-like; F-box,F-box domain,
cyclin-like; F-box domain,F-box domain, cyclin-l,CUFF.31986.1
(140 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g31000.1 87 4e-18
Glyma03g28230.1 87 5e-18
Glyma07g36360.1 73 1e-13
Glyma14g04080.1 73 1e-13
Glyma10g18630.1 72 2e-13
Glyma02g44660.2 71 3e-13
Glyma02g44660.1 71 3e-13
Glyma20g08260.1 69 1e-12
Glyma03g28220.1 63 1e-10
Glyma03g28210.1 62 1e-10
Glyma19g30990.1 62 2e-10
>Glyma19g31000.1
Length = 199
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 81/188 (43%), Gaps = 58/188 (30%)
Query: 9 NSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDT 68
++ L NL E +LDCILK LSPM LI+M EVCT RD C SD LWE + +KWG +I D
Sbjct: 1 GNVSLFNLQEPVLDCILKLLSPMGLIRMPEVCTFFRDRCGSDPLWEVHMKKKWGGVIGDV 60
Query: 69 ----------------------------------------------GKFWFPAQVYCDCA 82
G FWFPAQ +
Sbjct: 61 AYKEWQRHITKAKEKGINQSNQHNIQNGSVISRRFFMMTLYFSLENGNFWFPAQTFTGFV 120
Query: 83 -----LVSNVLFSYDSNTDTFKARAPSWGWKVIG-----HGFRWEKLRISPVEDPTCVRY 132
+++N++ ++ FK + +K + +W+KLR PV+ P C +
Sbjct: 121 TPYLDMIANLMTLKEAT--IFKNLIIGYTYKYDTSCGDINNIQWDKLRAPPVDTPACDGH 178
Query: 133 FCDCLEDL 140
DCL+DL
Sbjct: 179 MSDCLQDL 186
>Glyma03g28230.1
Length = 226
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 46/59 (77%)
Query: 11 ICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDTG 69
+ LLNLPE ILDCILK LSPMEL+ MSEVCTCLRD CRSD LWE I +KWG +I D
Sbjct: 1 MSLLNLPEPILDCILKLLSPMELVSMSEVCTCLRDRCRSDPLWEVHIKKKWGGVIGDVA 59
>Glyma07g36360.1
Length = 399
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQK 60
+EN E + + +L+LPEL LDCIL+RL P L +M+ VC LR+ C SDHLWE + QK
Sbjct: 77 VENVED-SHDMSVLDLPELALDCILERLPPSALCRMAAVCRSLRERCVSDHLWERHMRQK 135
Query: 61 WGRIIN 66
WGR+I
Sbjct: 136 WGRVIG 141
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 67 DTGKFWFPAQVYC-DCALVSNVL------FSYDSNTDTFKARAPSWGWKVIGH--GFRWE 117
++G FWF AQVY + + +L SYD TDTF+AR P G + G WE
Sbjct: 212 ESGNFWFLAQVYNRENGHIGFLLSCYDAELSYDPQTDTFQARYPPHGRRAGARECGIPWE 271
Query: 118 KLRISPVEDPTCVRYFCDCLEDL 140
+LR P++ +F DCL DL
Sbjct: 272 RLRAPPIDTSPHDLHFSDCLNDL 294
>Glyma14g04080.1
Length = 397
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 1 MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQK 60
+EN E + +L+LPEL+L+CIL++L P L +M+ VC LR++C SDHLWE + QK
Sbjct: 76 VENIED-SQDMSVLDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSDHLWERHMKQK 134
Query: 61 WGRIINDTG 69
WGRII
Sbjct: 135 WGRIIGQAA 143
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 67 DTGKFWFPAQVYC-DCALVSNVL------FSYDSNTDTFKARAPSWGWKVIG--HGFRWE 117
+TG FWFPAQVY + V +L SYD + DTF+AR P G + + HG WE
Sbjct: 210 ETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHNDTFQARYPPHGRRTVAVEHGIPWE 269
Query: 118 KLRISPVEDPTCVRYFCDCLEDL 140
+LR PV+ P + DC+ DL
Sbjct: 270 RLRAPPVDTPPHDLHISDCVYDL 292
>Glyma10g18630.1
Length = 297
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 67 DTGKFWFPAQVYCDCALVSNVLFSYDSNTDTFKARAPSWGWKVIGHGFRWEKLRISPVED 126
++G+FWFPAQVY ++ N L SYDS ++TF+AR + GW+ +G W+ +R+ V+
Sbjct: 126 ESGRFWFPAQVY-KGLMLHNALVSYDSESNTFQARYQTGGWRCLGRNIEWDMVRVPSVDS 184
Query: 127 PTCVRYFCDCLEDL 140
P V + DCL++L
Sbjct: 185 PPYVMHVSDCLDNL 198
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 11 ICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDT 68
+ LL+LPE LD ILK SP EL +SEVC L+D C+SDH WE+ I KWGR+I D
Sbjct: 1 VSLLDLPEPTLDLILKCFSPNELCTVSEVCVSLKDKCQSDHFWEHHIKHKWGRVIGDA 58
>Glyma02g44660.2
Length = 344
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 11 ICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDTG 69
+ +L+LPEL+L+CIL++L P L +M+ VC LR++C SDHLWE + QKWGR+I
Sbjct: 85 MSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVIGQAA 143
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 67 DTGKFWFPAQVYC-DCALVSNVL------FSYDSNTDTFKARAPSWGWKVIG--HGFRWE 117
+TG FWFPAQVY + V +L SYD +TDTF+AR P G + + HG WE
Sbjct: 210 ETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHTDTFQARYPPHGRRAVAVEHGIPWE 269
Query: 118 KLRISPVEDPTCVRYFCDCLEDL 140
+LR PV+ P + DCL DL
Sbjct: 270 RLRAPPVDTPPHDLHISDCLYDL 292
>Glyma02g44660.1
Length = 397
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 11 ICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDTG 69
+ +L+LPEL+L+CIL++L P L +M+ VC LR++C SDHLWE + QKWGR+I
Sbjct: 85 MSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVIGQAA 143
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 67 DTGKFWFPAQVYC-DCALVSNVL------FSYDSNTDTFKARAPSWGWKVIG--HGFRWE 117
+TG FWFPAQVY + V +L SYD +TDTF+AR P G + + HG WE
Sbjct: 210 ETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHTDTFQARYPPHGRRAVAVEHGIPWE 269
Query: 118 KLRISPVEDPTCVRYFCDCLEDL 140
+LR PV+ P + DCL DL
Sbjct: 270 RLRAPPVDTPPHDLHISDCLYDL 292
>Glyma20g08260.1
Length = 399
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 1 MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQK 60
+EN E+ + + +L+LPEL LDCIL+RL P L +++ VC LR+ C SDHLWE + +K
Sbjct: 77 VENVEESLD-MSVLDLPELALDCILERLPPSSLCRIAAVCRTLRERCVSDHLWEKHMRKK 135
Query: 61 WGRIINDTG 69
WGR+I
Sbjct: 136 WGRVIGPAA 144
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 67 DTGKFWFPAQVYC-DCALVSNVL------FSYDSNTDTFKARAPSWGWKVIGH--GFRWE 117
++G FWFPAQVY + V +L SYD TDTF+AR P G + G WE
Sbjct: 212 ESGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPRTDTFQARYPPHGRRADARECGIPWE 271
Query: 118 KLRISPVEDPTCVRYFCDCLEDL 140
+LR P++ + DCL DL
Sbjct: 272 RLRAPPIDTSPHDLHVSDCLNDL 294
>Glyma03g28220.1
Length = 257
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 16 LPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDTG 69
LPE LDCIL+ L P +L ++++VCT LRD RSD LWE I KWGR++ D
Sbjct: 1 LPEWTLDCILECLPPQDLCRVAQVCTSLRDRIRSDALWEKKIKHKWGRLLGDVA 54
>Glyma03g28210.1
Length = 401
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 22 DCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDTG 69
+CIL+ LSP EL +++ VCT LRD CRSDHLW+ + +KWG++ D
Sbjct: 100 ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDAA 147
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 67 DTGKFWFPAQVYCDCALVSNVLFS-------YDSNTDTFKARAPSWGWKVIGHGFRWEKL 119
++GKFWFPAQVY + + S YDS +DTF AR G +W++L
Sbjct: 214 ESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLARYSPHGRWTTEENIQWDRL 273
Query: 120 RISPVEDPTCVRYFCDCLEDL 140
R+ P+ + DCL+DL
Sbjct: 274 RVPPIATSPHALHISDCLDDL 294
>Glyma19g30990.1
Length = 399
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 22 DCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINDT 68
+CIL+ LSP EL +++ VCT LRD CRSDHLW+ + +KWG++ D
Sbjct: 98 ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDA 144
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 67 DTGKFWFPAQVYCDCALVSNVLFS-------YDSNTDTFKARAPSWGWKVIGHGFRWEKL 119
++GKFWFPAQVY + + S YDS +DTF AR G +W++L
Sbjct: 212 ESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLARYSPHGRWTTEENIQWDRL 271
Query: 120 RISPVEDPTCVRYFCDCLEDL 140
R+ P+ + DCL+DL
Sbjct: 272 RVPPIASSPHALHISDCLDDL 292