Miyakogusa Predicted Gene

Lj1g3v4118220.3
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4118220.3 Non Chatacterized Hit- tr|K3XIG9|K3XIG9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001691,35.97,2e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; FBOX,F-box domain, cyclin-like; A Recepto,CUFF.31968.3
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g18630.1                                                       161   4e-40
Glyma03g28230.1                                                       155   2e-38
Glyma14g04080.1                                                       118   2e-27
Glyma02g44660.1                                                       116   9e-27
Glyma02g44660.2                                                       116   1e-26
Glyma19g31000.1                                                       115   2e-26
Glyma20g08260.1                                                       110   9e-25
Glyma03g28210.1                                                       109   1e-24
Glyma19g30990.1                                                       108   4e-24
Glyma07g36360.1                                                       105   3e-23
Glyma03g28220.1                                                        71   7e-13

>Glyma10g18630.1 
          Length = 297

 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/158 (48%), Positives = 101/158 (63%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLL+LPEP LD ILK  SP EL  +S VC  L+D C+SDH WE+HI  KWG ++GD  +K
Sbjct: 2   SLLDLPEPTLDLILKCFSPNELCTVSEVCVSLKDKCQSDHFWEHHIKHKWGRVIGDAVYK 61

Query: 69  EWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSMLAL 128
           EW+WH+T  K          +Q  S+G+F G  P    GSYL+D   L    PNN +++L
Sbjct: 62  EWEWHITIAKEGSFLNQNTNNQTGSMGTFTGVWPNLYLGSYLEDCKVLNGQRPNNFLMSL 121

Query: 129 YFSLQGGKFWFPAQFYRGPRVRDALFRHEPTSQTFTAR 166
           YFSL+ G+FWFPAQ Y+G  + +AL  ++  S TF AR
Sbjct: 122 YFSLESGRFWFPAQVYKGLMLHNALVSYDSESNTFQAR 159


>Glyma03g28230.1 
          Length = 226

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/139 (58%), Positives = 92/139 (66%), Gaps = 14/139 (10%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SLLNLPEPILDCILKLLSP+EL+ MS VCTCLRD CRSD LWE HI +KWG ++GD A+K
Sbjct: 2   SLLNLPEPILDCILKLLSPMELVSMSEVCTCLRDRCRSDPLWEVHIKKKWGGVIGDVAYK 61

Query: 69  EWQWHL--TKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSML 126
           EW WH+  TK K           QN SLG F   C            + L T L N+ M+
Sbjct: 62  EWHWHITTTKEKGINQLHQQHNIQNGSLGPFSEDC------------SHLNTSLANSFMM 109

Query: 127 ALYFSLQGGKFWFPAQFYR 145
           ALYFSL+ GKFWFPAQ YR
Sbjct: 110 ALYFSLENGKFWFPAQIYR 128


>Glyma14g04080.1 
          Length = 397

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 12/174 (6%)

Query: 3   EDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIV 62
           ED  D S+L+LPE +L+CIL+ L P  L +M+ VC  LR++C SDHLWE H+ QKWG I+
Sbjct: 80  EDSQDMSVLDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSDHLWERHMKQKWGRII 139

Query: 63  GDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLR--TFL 120
           G  A++EW+WH+    +          Q   L     S P     + +   N ++  ++L
Sbjct: 140 GQAAYREWKWHVASKGNVGTLRHG--KQRSLLRLVSLSWPFSWMRTKVDANNSIKQQSYL 197

Query: 121 PNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           P +S++  Y +L+ G FWFPAQ Y              DA   ++P + TF AR
Sbjct: 198 PPDSLMTWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHNDTFQAR 251


>Glyma02g44660.1 
          Length = 397

 Score =  116 bits (291), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 12/174 (6%)

Query: 3   EDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIV 62
           ED  D S+L+LPE +L+CIL+ L P  L +M+ VC  LR++C SDHLWE H+ QKWG ++
Sbjct: 80  EDSQDMSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVI 139

Query: 63  GDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLR--TFL 120
           G  A++EW+WH     +          Q   L     S P     + +   N ++  ++L
Sbjct: 140 GQAAYREWKWHAASKGNVGTLRHG--KQRSLLRLVSLSWPFSWMRTKVDANNSIKQQSYL 197

Query: 121 PNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           P +S++  Y +L+ G FWFPAQ Y              DA   ++P + TF AR
Sbjct: 198 PPDSLMTWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHTDTFQAR 251


>Glyma02g44660.2 
          Length = 344

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 12/174 (6%)

Query: 3   EDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIV 62
           ED  D S+L+LPE +L+CIL+ L P  L +M+ VC  LR++C SDHLWE H+ QKWG ++
Sbjct: 80  EDSQDMSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVI 139

Query: 63  GDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLR--TFL 120
           G  A++EW+WH     +          Q   L     S P     + +   N ++  ++L
Sbjct: 140 GQAAYREWKWHAASKGNVGTLRHG--KQRSLLRLVSLSWPFSWMRTKVDANNSIKQQSYL 197

Query: 121 PNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           P +S++  Y +L+ G FWFPAQ Y              DA   ++P + TF AR
Sbjct: 198 PPDSLMTWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPHTDTFQAR 251


>Glyma19g31000.1 
          Length = 199

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 76/138 (55%), Gaps = 23/138 (16%)

Query: 9   SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
           SL NL EP+LDCILKLLSP+ LI+M  VCT  RD C SD LWE H+ +KWG ++GD A+K
Sbjct: 4   SLFNLQEPVLDCILKLLSPMGLIRMPEVCTFFRDRCGSDPLWEVHMKKKWGGVIGDVAYK 63

Query: 69  EWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSMLAL 128
           EWQ H+TK K            N   GS                    R F     M+ L
Sbjct: 64  EWQRHITKAKEKGINQSN--QHNIQNGSVIS-----------------RRFF----MMTL 100

Query: 129 YFSLQGGKFWFPAQFYRG 146
           YFSL+ G FWFPAQ + G
Sbjct: 101 YFSLENGNFWFPAQTFTG 118


>Glyma20g08260.1 
          Length = 399

 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 13/175 (7%)

Query: 3   EDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIV 62
           E+ +D S+L+LPE  LDCIL+ L P  L +++ VC  LR+ C SDHLWE H+ +KWG ++
Sbjct: 81  EESLDMSVLDLPELALDCILERLPPSSLCRIAAVCRTLRERCVSDHLWEKHMRKKWGRVI 140

Query: 63  GDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQ-DFN--QLRTF 119
           G  A++EW+WH+   ++          Q   +       P       +  ++N  +LR+ 
Sbjct: 141 GPAAYREWKWHVASKRNVGGLKHG--RQKGLMRFMSLHWPFQWIRPKVDANYNNPKLRSS 198

Query: 120 LPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           LP +S++  Y +L+ G FWFPAQ Y              DA   ++P + TF AR
Sbjct: 199 LPVDSVMNWYLALESGNFWFPAQVYNRENGHVGFMLSCYDAELSYDPRTDTFQAR 253


>Glyma03g28210.1 
          Length = 401

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 85/160 (53%), Gaps = 16/160 (10%)

Query: 19  DCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFKEWQWHLTKFK 78
           +CIL+ LSP EL +++ VCT LRD CRSDHLW+ H+ +KWG + GD A+++W+WH+    
Sbjct: 100 ECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDAAYRQWKWHVASKN 159

Query: 79  SXXXXXXALLDQNCSLGSFC----GSCPLPCTGSYLQDFNQLRTFLPNNSMLALYFSLQG 134
                     +Q+   G F     G  P     +  +   +  + LP +S+ ALY SL+ 
Sbjct: 160 REKISS----NQHNQKGIFAFLRGGFLPFIWIKAKSEKGTESSSSLPEDSIAALYLSLES 215

Query: 135 GKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           GKFWFPAQ Y              DA   ++  S TF AR
Sbjct: 216 GKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLAR 255


>Glyma19g30990.1 
          Length = 399

 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 16/177 (9%)

Query: 2   EEDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTI 61
           EE+ +  SLL+LP+  L+CIL+ LSP EL +++ VCT LRD CRSDHLW+ H+ +KWG +
Sbjct: 81  EEEEVKVSLLDLPDLPLECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKV 140

Query: 62  VGDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFC----GSCPLPCTGSYLQDFNQLR 117
            GD  +++W+W +    +         +Q+   G F     G  PL    +  +   Q  
Sbjct: 141 FGDAVYRQWKWQV----ASKTREKISSNQHNQKGIFAFLNGGFLPLLWIKAKSEKGTQSN 196

Query: 118 TFLPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           + L  +S+ ALY SL+ GKFWFPAQ Y              DA   ++  S TF AR
Sbjct: 197 SSLSEDSIAALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLAR 253


>Glyma07g36360.1 
          Length = 399

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 13/175 (7%)

Query: 3   EDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIV 62
           ED  D S+L+LPE  LDCIL+ L P  L +M+ VC  LR+ C SDHLWE H+ QKWG ++
Sbjct: 81  EDSHDMSVLDLPELALDCILERLPPSALCRMAAVCRSLRERCVSDHLWERHMRQKWGRVI 140

Query: 63  GDFAFKEWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFN---QLRTF 119
           G  A++EW+WH+   ++          Q   +       PL          N   +  + 
Sbjct: 141 GPAAYREWKWHVASKRNVGGLKHG--RQKGLMRFMSLRWPLQWIRPKADANNNSPKQGSS 198

Query: 120 LPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
           LP +S++  Y +L+ G FWF AQ Y              DA   ++P + TF AR
Sbjct: 199 LPVDSVMNWYLALESGNFWFLAQVYNRENGHIGFLLSCYDAELSYDPQTDTFQAR 253


>Glyma03g28220.1 
          Length = 257

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 11/85 (12%)

Query: 13 LPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFKEWQW 72
          LPE  LDCIL+ L P +L +++ VCT LRD  RSD LWE  I  KWG ++GD A +EW +
Sbjct: 1  LPEWTLDCILECLPPQDLCRVAQVCTSLRDRIRSDALWEKKIKHKWGRLLGDVAHQEWHF 60

Query: 73 HLTKFKSXXXXXXALLDQNCSLGSF 97
           L +            +Q+ S GSF
Sbjct: 61 LLLQ-----------QNQSGSYGSF 74