Miyakogusa Predicted Gene

Lj1g3v4058510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058510.1 tr|D1LUD0|D1LUD0_MEDTR PKS (Fragment) OS=Medicago
truncatula PE=2 SV=1,50.42,0.000000000000003,seg,NULL,CUFF.31806.1
         (407 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g27300.1                                                       154   2e-37
Glyma05g13620.1                                                        52   2e-06

>Glyma03g27300.1 
          Length = 372

 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 137/244 (56%), Gaps = 42/244 (17%)

Query: 62  IDDSNSELSIFDAHKYFNELANNDTQKVTICXXXXXXXXRVSPMENERVIIPETARYSSA 121
           I+D+ +ELSIFDA KYFN+  +++                    +    II E  RYSSA
Sbjct: 36  IEDATTELSIFDARKYFNDDDSSNNNNNNANNI----------QKRGDAIITEATRYSSA 85

Query: 122 SSSVDGYGGIRNYRARSFHAATPTASSEASWNSQQGLLSHPQGAISVSVRNPTXXXXXXX 181
           SSSVD Y  IRNYRA+SFH ATPTASSEASWNSQ GLLSHP GAI VS++NP        
Sbjct: 86  SSSVDSYAQIRNYRAQSFHTATPTASSEASWNSQTGLLSHPPGAIPVSMQNPQNPKNLPN 145

Query: 182 XXXXHRRTSLSKSNWLLRRKCPCSGKKSVQVEEKKKTLEPKINTIXXXXXXXXXXXXXXX 241
                     SKS WLLRRKCPC+GKKSV+V+E  +  + +I+                 
Sbjct: 146 PK-------FSKSIWLLRRKCPCTGKKSVRVKESTQESKSQIS----------------- 181

Query: 242 XXXNQHHVHDQFTVTPNDWVTTDHAPNIVAAKSQRF-QVQPHPIVTTVRVPFTDGFTFPV 300
                +  H+   V P           IVAAKSQ+F     H +V++VRVPFTDGFTFPV
Sbjct: 182 QQERDYEHHNNNNVPP-------ATATIVAAKSQQFNNSNSHRVVSSVRVPFTDGFTFPV 234

Query: 301 LNPN 304
           L+PN
Sbjct: 235 LHPN 238


>Glyma05g13620.1 
          Length = 235

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 136 ARSFHAATPTASSEAS---WNSQQGLLSHPQGAISVSVRNPTXXXXXXXXXXXHRRTSLS 192
           A SFH ATPT    +S    N++ GLL H      +SV+ P              +TSLS
Sbjct: 42  AHSFHVATPTPPPSSSKSTLNNKAGLLLHHPQTSKISVKPPQTSSNLTKKL----KTSLS 97

Query: 193 KSNWLLRRKCPCSGKKSVQVE 213
           K  WLLRRKCPC  KKSVQV+
Sbjct: 98  KPIWLLRRKCPCKDKKSVQVK 118