Miyakogusa Predicted Gene

Lj1g3v4058490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058490.1 Non Chatacterized Hit- tr|I3T4V1|I3T4V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.62,0,HIT-like,HIT-like domain; HIT_2,Histidine triad (HIT)
protein; no description,HIT-like domain; HIT_1,CUFF.31810.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g20320.1                                                       243   4e-65
Glyma19g30260.1                                                       221   1e-58
Glyma15g17330.1                                                       201   3e-52
Glyma08g45960.1                                                        49   2e-06

>Glyma19g20320.1 
          Length = 159

 Score =  243 bits (621), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 119/141 (84%), Positives = 127/141 (90%), Gaps = 4/141 (2%)

Query: 8   SHLVRA---MASEKDAALAATPPSSEYTPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQ 64
           SH  R+   MASEK AALA TP  ++  PTIFD+IINKEIPSTVVYEDDKVLAFRDI PQ
Sbjct: 20  SHFARSSPIMASEKQAALAVTPSDAD-APTIFDKIINKEIPSTVVYEDDKVLAFRDITPQ 78

Query: 65  APVHILIIPKVRDGLTGLSKAEERHFEILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGC 124
           AP HILIIPK +DGL+GLSKAEERHFEILGRLL+TAKLVAKQEGLDDGFRIVINDGPKGC
Sbjct: 79  APTHILIIPKFKDGLSGLSKAEERHFEILGRLLYTAKLVAKQEGLDDGFRIVINDGPKGC 138

Query: 125 QSVYHIHVHLLGGRQMDWPPG 145
           QSVYHIHVHLLGGRQM+WPPG
Sbjct: 139 QSVYHIHVHLLGGRQMNWPPG 159


>Glyma19g30260.1 
          Length = 129

 Score =  221 bits (564), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 112/131 (85%), Positives = 116/131 (88%), Gaps = 3/131 (2%)

Query: 14  MASEKDAALAATPPSSEYTPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIP 73
           MASE +AALAATP      PT+FD+IINKEIPSTVVYEDDKVLAFRDI PQAP HILIIP
Sbjct: 1   MASETEAALAATPSDG---PTVFDKIINKEIPSTVVYEDDKVLAFRDIDPQAPTHILIIP 57

Query: 74  KVRDGLTGLSKAEERHFEILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVH 133
           KVRDGLTGLSKAEERH EILGRLL TAKLVAKQEGLDDGFRIVINDG  G QSVYHIHVH
Sbjct: 58  KVRDGLTGLSKAEERHCEILGRLLCTAKLVAKQEGLDDGFRIVINDGRDGGQSVYHIHVH 117

Query: 134 LLGGRQMDWPP 144
           L+GGRQM WPP
Sbjct: 118 LIGGRQMGWPP 128


>Glyma15g17330.1 
          Length = 178

 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 90/133 (67%), Positives = 113/133 (84%)

Query: 13  AMASEKDAALAATPPSSEYTPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILII 72
           A+ +E+ AA  A        PTIFD+IINKEIPS++VYED+KVLAFRDI PQAPVH+L+I
Sbjct: 46  AVNNEEAAAKTAAVNFDSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVI 105

Query: 73  PKVRDGLTGLSKAEERHFEILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHV 132
           PK+RDGLT L KA+ RH EILG+LL+ AK+VA++EG+DDGFR+VIN+GP  CQSVYH+H+
Sbjct: 106 PKLRDGLTQLGKADSRHGEILGQLLYAAKIVAEKEGIDDGFRVVINNGPSACQSVYHLHL 165

Query: 133 HLLGGRQMDWPPG 145
           H+LGGRQM+WPPG
Sbjct: 166 HVLGGRQMNWPPG 178


>Glyma08g45960.1 
          Length = 207

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 26/121 (21%)

Query: 34  TIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSKAEERHF--- 90
            +F +II  + P+  +YEDD  L   D +P +  H LIIPK              HF   
Sbjct: 52  CVFCKIIRDQSPAVKLYEDDMCLCILDTSPLSHGHSLIIPK-------------SHFPSL 98

Query: 91  ---------EILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMD 141
                     +  ++   +  + K  G    F +++N+G    Q +YH H+H++  +  D
Sbjct: 99  DATPPSVVAAMCSKVPFISNAIMKATGC-SSFNLLVNNGAAAGQVIYHTHMHIIPRKAYD 157

Query: 142 W 142
            
Sbjct: 158 C 158