Miyakogusa Predicted Gene

Lj1g3v4047390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4047390.1 Non Chatacterized Hit- tr|B9STU6|B9STU6_RICCO
Mom(Plant), putative OS=Ricinus communis
GN=RCOM_05439,65.91,0.000000002,seg,NULL,CUFF.31898.1
         (462 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g08230.4                                                       128   1e-29
Glyma11g20330.1                                                        91   3e-18
Glyma12g29920.1                                                        63   8e-10

>Glyma12g08230.4 
          Length = 461

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 110/168 (65%), Gaps = 7/168 (4%)

Query: 242 SGPVQELSENNVTQGLLVPSDAATHET-SGASERVQSDCHREEEASRTLASRSSMLNENL 300
           SGP++EL +NNVT   +V S+AAT E  SGA ERVQS+  +EE   + L SR S+ NENL
Sbjct: 288 SGPLKELLDNNVTVNSIVSSNAATCEPPSGAPERVQSESCKEETLQK-LGSRDSISNENL 346

Query: 301 SQKCA---NGENLIPCKRKRITGDKDSDVSATSADDEDCNLIVDARSSRPFSKIVKTSES 357
             KC     GE  I  KRKR   D  ++ SA   D+++ NLI DA  SR    +V+TS S
Sbjct: 347 IMKCVENDKGEKSISSKRKRNMVDMHANASAMLVDNDNSNLIEDAHPSRICGNVVETSGS 406

Query: 358 CSKRIRRISL--SDMQRDQKKSMNNVDQLCSKSNGERLSTSNKEGNSG 403
            SKRIR ISL  SD++RD +K+ NNVDQ  SKS G+ LST NK+GNSG
Sbjct: 407 RSKRIRHISLSESDVKRDGRKTANNVDQPSSKSYGDNLSTRNKDGNSG 454


>Glyma11g20330.1 
          Length = 222

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 83/140 (59%), Gaps = 13/140 (9%)

Query: 232 VPSDAATHET------SGPVQELSENNVTQGLLVPSDAATHET-SGASERVQSD-CHREE 283
           +P DA + E       SGP++EL +NN T   LVPS+AAT E  SGASERVQS+ C   E
Sbjct: 85  LPEDANSKEMRAESKLSGPLKELLDNNATLNSLVPSNAATCEPPSGASERVQSESCM--E 142

Query: 284 EASRTLASRSSMLNENLSQKCA---NGENLIPCKRKRITGDKDSDVSATSADDEDCNLIV 340
           E S+   SR S++NENL +KC     GE  I  KRK+   D  SD SA   D+   NLI 
Sbjct: 143 ETSQKSGSRDSIINENLIRKCVENDKGEKSISLKRKKNMLDMHSDASAMLVDNNISNLIE 202

Query: 341 DARSSRPFSKIVKTSESCSK 360
           DA  SR    +V+TS SCSK
Sbjct: 203 DAHPSRICGNVVETSGSCSK 222


>Glyma12g29920.1 
          Length = 664

 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 423 QRSLHLKLKPKIASLCEILLLPDNVKSMVENCLEYTMNNH 462
           QRSL L LKP+I  LC++LLLPDNVK M++N LEY M+NH
Sbjct: 416 QRSLLLLLKPEIRKLCDVLLLPDNVKRMIDNFLEYIMSNH 455