Miyakogusa Predicted Gene

Lj1g3v4027090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027090.1 Non Chatacterized Hit- tr|C6T9G2|C6T9G2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23267
PE,38.76,0.000000000002,seg,NULL,CUFF.31781.1
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g30060.1                                                        68   6e-12

>Glyma19g30060.1 
          Length = 253

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 25/129 (19%)

Query: 8   VLVCLRWLIRKFVYQNLTGDELVKLFPPDLPLHLQTILLLCFQKNGQCWRDDVSAQQDLL 67
           VL CLR L+RK  +QNL  D+L++LFP DLP+ LQT L+   Q+N   W++DVS     L
Sbjct: 60  VLACLRSLVRKCAHQNLARDDLLRLFPRDLPIQLQTNLVSALQRNRDRWKEDVSHVIPQL 119

Query: 68  PATGVSSEVRTDIAXXXXXXXXXXXXXXXWPRQDPDSLAQMNQSDFGISTPLVADCNVSG 127
             T                          WPRQ+ D  A    +      P       SG
Sbjct: 120 KGT------------------INFAPSLLWPRQEQDFDAVAVPAVVPDVGP-------SG 154

Query: 128 LPACFQCDV 136
           + +CFQCD 
Sbjct: 155 VNSCFQCDA 163