Miyakogusa Predicted Gene

Lj1g3v4027080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027080.1 Non Chatacterized Hit- tr|I1INQ4|I1INQ4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,33.22,2e-18,coiled-coil,NULL; seg,NULL,CUFF.31785.1
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g12840.1                                                       194   8e-50
Glyma03g00730.1                                                       176   3e-44
Glyma19g30000.1                                                       130   2e-30
Glyma11g36110.1                                                        52   9e-07
Glyma18g02320.1                                                        49   8e-06

>Glyma05g12840.1 
          Length = 282

 Score =  194 bits (494), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/314 (45%), Positives = 159/314 (50%), Gaps = 58/314 (18%)

Query: 1   MEQLENAGAARASLLSQLKDALQEQESRQEHVHAQLQVVRDQIEKAAGIKKRLNQAAEAT 60
           M QLENA AARA+LLSQLKDALQEQESRQE VH QL   + QIE+AA I+KR   A EAT
Sbjct: 1   MVQLENAEAARATLLSQLKDALQEQESRQELVHTQLLAAQGQIEQAASIRKRFTVAPEAT 60

Query: 61  ------FPSVXXXXXXXXXXXXXXXXXFAPSRXXXXXXXXXXXXXXXXXXXXXXXXXQML 114
                  PS                                                 ML
Sbjct: 61  RALEQNLPSKAAAAAVAAKLAASTSSAL------------------------------ML 90

Query: 115 TSVLSSLVAEEAASMKGSLNSTGFTSGLPAFNQDKRQKLEKPAPVSDVNNSSDMANSSFY 174
           TSVLSSLVAEEAASM GSLNSTGFTSGLP F  +KRQKLEK    S+  NS+DM +SSF 
Sbjct: 91  TSVLSSLVAEEAASMNGSLNSTGFTSGLPVFRPEKRQKLEKQMHASEF-NSTDMGSSSFL 149

Query: 175 ANLQQPST---------NMQNMSQANHLQAAFTSA---PPPMPHSSANQPYGQSTGMMAG 222
             LQQPS          ++Q + Q N  QAAF S    P    +  ANQ + QSTG+M G
Sbjct: 150 GTLQQPSVANVPLTHSISLQPIPQPNQSQAAFASGPPPPHSPVNPPANQ-FVQSTGLMVG 208

Query: 223 GIPYGYGSNS--XXXXXXXXXHVXXXXXXX-----XXXXXXXXXXXXXXFYRPSGMGFYG 275
           GIPYGYGSN+           HV                          FYRP  +GFYG
Sbjct: 209 GIPYGYGSNNLPPPPPPPLPPHVAMGLSMAGMQPSQSQAQQQQPSATGGFYRPPDIGFYG 268

Query: 276 QSHPST-PPPVSRQ 288
           QSH ST P PV RQ
Sbjct: 269 QSHSSTQPAPVPRQ 282


>Glyma03g00730.1 
          Length = 189

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/190 (57%), Positives = 120/190 (63%), Gaps = 15/190 (7%)

Query: 113 MLTSVLSSLVAEEAASMKGSLNSTGFTSGLPAFNQDKRQKLEKPAPVSDVNNSSDMANSS 172
           MLTSVLSSLVAEEAAS+ GSLNSTGF+SGLP FN +KR KLEKP P  D +N  DMANS 
Sbjct: 1   MLTSVLSSLVAEEAASLNGSLNSTGFSSGLPIFNPEKRPKLEKPTPAHDASN-YDMANSP 59

Query: 173 FYANLQQ---------PSTNMQNMSQANHLQAAFTSAPPPMPHSSANQP---YGQSTGMM 220
           FYA +QQ         PS  MQ +SQA+ LQ AF S PPP  HS ANQP   Y QSTG+M
Sbjct: 60  FYATMQQPSLANVPLAPSVGMQAVSQASQLQPAFASPPPPPLHSLANQPSNQYVQSTGLM 119

Query: 221 AGGIPYGYGSNS--XXXXXXXXXHVXXXXXXXXXXXXXXXXXXXXXFYRPSGMGFYGQSH 278
           AGGIPYGY SNS           H+                     FYRP G+GFYG+SH
Sbjct: 120 AGGIPYGYRSNSLPPPPPPPLPPHMAIGLSMPGTQPAQQQQQSPPGFYRPPGIGFYGKSH 179

Query: 279 PSTPPPVSRQ 288
           PSTPPPV RQ
Sbjct: 180 PSTPPPVPRQ 189


>Glyma19g30000.1 
          Length = 462

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/182 (52%), Positives = 102/182 (56%), Gaps = 54/182 (29%)

Query: 112 QMLTSVLSSLVAEEAASMKGSLNSTGFTSGLPAFNQDKRQKLEKPAPVSD--VNNSSDMA 169
           QMLTSVLSSLVAEEAAS+ GSLNSTGF+S LP FN +KR KLEKP P  D  V N     
Sbjct: 330 QMLTSVLSSLVAEEAASLNGSLNSTGFSSVLPIFNPEKRPKLEKPTPAHDPPVPN----- 384

Query: 170 NSSFYANLQQPSTNMQNMSQANHLQAAFTSAPPPMPHSSANQ---PYGQSTGMMAGGIPY 226
                  L  P   MQ +SQAN LQ AF S PPP+PHSSA Q    Y QSTG+MAGGIPY
Sbjct: 385 -----VPLTLP-VGMQTVSQANQLQVAFASPPPPLPHSSAYQQSNQYVQSTGLMAGGIPY 438

Query: 227 GYGSNSXXXXXXXXXHVXXXXXXXXXXXXXXXXXXXXXFYRPSGMGFYGQSHPSTPPPVS 286
           GYG                                      P G+GFYGQSH STPPPV 
Sbjct: 439 GYG--------------------------------------PPGIGFYGQSHLSTPPPVP 460

Query: 287 RQ 288
           RQ
Sbjct: 461 RQ 462


>Glyma11g36110.1 
          Length = 469

 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 40/54 (74%)

Query: 1   MEQLENAGAARASLLSQLKDALQEQESRQEHVHAQLQVVRDQIEKAAGIKKRLN 54
           +E+L+   A+R +L+SQLK+AL EQES  E+V  Q+QV + QIE+A  +++ L+
Sbjct: 236 VEKLKLVEASRVALVSQLKEALHEQESELENVRTQMQVAQAQIEEACNMRRILD 289


>Glyma18g02320.1 
          Length = 292

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 38/52 (73%)

Query: 3   QLENAGAARASLLSQLKDALQEQESRQEHVHAQLQVVRDQIEKAAGIKKRLN 54
           +L+   A+R +L+SQLK+AL EQES  E+V  Q+QV + Q+E+A  ++K L+
Sbjct: 210 KLKLVEASRVALVSQLKEALHEQESELENVRTQMQVAQAQVEEACNMRKILD 261