Miyakogusa Predicted Gene
- Lj1g3v4012930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4012930.1 Non Chatacterized Hit- tr|K3ZIR8|K3ZIR8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026470,26.53,8e-18,F_box_assoc_1: F-box protein interaction
domain,F-box associated interaction domain; seg,NULL;
F-box,gene.g35928.t1.1
(396 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g10360.1 60 4e-09
Glyma06g13220.1 57 4e-08
Glyma16g32780.1 57 5e-08
Glyma17g02100.1 55 1e-07
Glyma09g03750.1 52 1e-06
Glyma16g27870.1 52 2e-06
Glyma1314s00200.1 51 2e-06
Glyma16g32770.1 50 5e-06
Glyma16g32800.1 50 5e-06
Glyma10g34340.1 49 1e-05
>Glyma08g10360.1
Length = 363
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 135/330 (40%), Gaps = 51/330 (15%)
Query: 16 RDTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHYLRHNPAALLLSNKYGPLPRS 75
+D ++ IL RLP K L++ K V K WL LISD RF +SH+ A L+++
Sbjct: 5 QDLITEILLRLPVKSLVRFKSVCKSWLFLISDPRFAKSHF----ELAAALADR------- 53
Query: 76 HILSFTTTTATIRDLDLD--FLTNHIFRAKRVDT-----------VVCSCNGVLLCRSAT 122
IL ++ +R +D + + A VD ++ SC G +L +
Sbjct: 54 -ILFIASSAPELRSIDFNASLHDDSASVAVTVDLPAPKPYFHFVEIIGSCRGFILLHCLS 112
Query: 123 SHFICNPXXXXXXXXXXPKQRSKNNQECAFY-----LAFDPSTSPHYEIVLLRIWGGVKP 177
+ NP P N++ F+ +DPST + +++ K
Sbjct: 113 HLCVWNP--TTGVHKVVPLSPIFFNKDAVFFTLLCGFGYDPSTD---DYLVVHACYNPKH 167
Query: 178 PFRCVFSVYSSKTRSWRDSASGVSF-NAQFRLN---DANGVYSNRAIHWFNKAAELSGDC 233
C ++S + +W+ G+ F FR + G + N AIHW A ++
Sbjct: 168 QANCA-EIFSLRANAWK-GIEGIHFPYTHFRYTNRYNQFGSFLNGAIHWL--AFRINASI 223
Query: 234 TGGMYFDIDARCLKELPMPLFDDSESESVNRNVKYFGESGG--CLQLIIGIKETLKFDVF 291
+ FD+ R E+ +P+ E + N + G G L ++G +++
Sbjct: 224 NVIVAFDLVERSFSEMHLPV----EFDYGKLNFCHLGVLGEPPSLYAVVGYNHSIEMWAM 279
Query: 292 ELKEDYSAW--SLIHSVNLNPTRVKFPELS 319
+ + S+W S++ SV+ R FP S
Sbjct: 280 KEYKVQSSWTKSIVISVDGFAIRSFFPVCS 309
>Glyma06g13220.1
Length = 376
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 102/259 (39%), Gaps = 52/259 (20%)
Query: 22 ILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHYLRHNPAALLLSNKYGPLPRSHILSFT 81
IL RLP K L++ K V K WL L+SD F SH+ + P R+H L F
Sbjct: 26 ILLRLPVKSLVRFKCVCKSWLCLLSDPHFATSHFEQ-------------PSTRTHRLIFI 72
Query: 82 TTTAT--IRDLD---------------LDFLTNHIFRAKRVDTVVCSCNGVLLCRSATSH 124
++ IR +D L+FL + + + ++ SC G LL S
Sbjct: 73 VAPSSPQIRSIDFNASLYDDSAWAALNLNFLRPNTYHNVQ---ILGSCRGFLLLNGCQSL 129
Query: 125 FICNPXXXXXXXXXXPKQRSKNNQECAFY-----LAFDPSTSPHYEIVLLRIWGGVKPPF 179
+ NP S N FY +D ST + L + P
Sbjct: 130 WAWNPSTGVYKKLSSSPIGS-NLMRSVFYTFLYGFGYDSSTDDY-----LVVKASYSPIS 183
Query: 180 R----CVFSVYSSKTRSWRD-SASGVSFNAQFRLNDANGVYSNRAIHWFNKAAELSGDCT 234
R F S + +W D A+ +S+ + A G++ N AIHW ++S D
Sbjct: 184 RYNATTRFEFLSLRANAWTDIEAAHLSYMNSSQGIGA-GLFLNGAIHWLVFCCDVSLDVV 242
Query: 235 GGMYFDIDARCLKELPMPL 253
+ FD+ R E+P+P+
Sbjct: 243 --VAFDLTERSFSEIPLPV 259
>Glyma16g32780.1
Length = 394
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 98/247 (39%), Gaps = 24/247 (9%)
Query: 16 RDTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHY-LRHNPAA-LLLSNKYGPLP 73
D ++ IL LP + +++ K + K W LISD F RSH+ L P L LS +
Sbjct: 25 EDLITEILMMLPVRSILRFKCMCKLWFSLISDPEFARSHFALAATPTTRLFLSTNGYQVE 84
Query: 74 RSHI---LSFTTTTATIRDLDLDFLTNHIFRAKRVDTVVCSCNG--VLLCRSATSHFICN 128
+ I L + + + L N + +V SC G +LL A I N
Sbjct: 85 CTDIEASLHDDNSAKVVFNFPLPSPENEYYNC--AINIVGSCRGFILLLTSGALDFIIWN 142
Query: 129 PXXXXXXXXXXPKQRSKNN---QECAFYLAFDPSTSPHYEIVLLRIWGGVKPPFRCVFSV 185
P N C F +D ST Y IV L I G +R
Sbjct: 143 PSTGLRKGIRYVMDDHVYNFYADRCGF--GYDSSTD-DYVIVNLTIEG-----WRTEVHC 194
Query: 186 YSSKTRSWRDSASGVSFNAQFRLNDANGVYSNRAIHWFNKAAELSGDCTGGMYFDIDARC 245
+S +T SW + F L+ NGV+ N A+HWF + + FD+ R
Sbjct: 195 FSLRTNSWSRILGTAIY---FPLDCGNGVFFNGALHWFGRLWDGHRQAV-ITSFDVTERG 250
Query: 246 LKELPMP 252
L E+P+P
Sbjct: 251 LFEIPLP 257
>Glyma17g02100.1
Length = 394
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 32/254 (12%)
Query: 16 RDTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHY-LRHNPAALLLSNKYGPLPR 74
++ + IL RLP K LI+ K V K WL ISD F SH+ L P LL P+ R
Sbjct: 34 QELIHEILLRLPVKSLIRFKTVCKSWLSHISDPHFTASHFKLGAAPTERLLF--LSPIAR 91
Query: 75 SHI-LSFTTTT---ATIRDLDLDFLTNHIFRAKRVDTVVCSCNGVLLCRSATSHFICNPX 130
+ + F + + L+ DF+ + + ++ SC G LL + + NP
Sbjct: 92 EFLSIDFNESLNDDSASAALNCDFVEHFDYLE-----IIGSCRGFLLLDFRYTLCVWNPS 146
Query: 131 XXXXXXXXXPKQRSKN------NQECAFYL---AFDPSTSPHYEIVLLRIWGGVKPPFRC 181
S N E + + +DPST + L +
Sbjct: 147 TGVHQFVKWSPFVSSNIMGLDVGDEFSLSIRGFGYDPSTDDY-----LAVLASCNDELVI 201
Query: 182 V-FSVYSSKTRSWRD-SASGVSFNAQFRLNDANGVYSNRAIHWFNKAAELSGDCTGGMYF 239
+ +S + +W++ AS +SF A+ N+ G + N AIHW + E+S D + F
Sbjct: 202 IHMEYFSLRANTWKEIEASHLSF-AEIAYNEV-GSFLNTAIHWLAFSLEVSMDVI--VAF 257
Query: 240 DIDARCLKELPMPL 253
D+ R E+ +P+
Sbjct: 258 DLTERSFSEILLPI 271
>Glyma09g03750.1
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 46/320 (14%)
Query: 17 DTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRR--SHYLRHNPAALLLSNKYGPLPR 74
+ + IL RLP K L + K V K W L D F + + R NP L+ +
Sbjct: 12 EVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISDSSESKT 71
Query: 75 SHILSFTTTTATIRDLDLDFLTNHIFRAKRVDTVVCSCNGVLLCRSATSH---FICNPXX 131
S I + + L+FL + + V SCNG+L C S ++CNP
Sbjct: 72 SLIC--VDNLRGVSEFSLNFLNDRV-------KVRASCNGLLCCSSIPDKGVFYVCNP-- 120
Query: 132 XXXXXXXXPKQRSK-------NNQECAFYLAFDPSTSPHYEIVLL---RIWGGVKPPFRC 181
PK R + + + LA D S + +VL R++G +P
Sbjct: 121 VTREYRLLPKSRERHVTRFYPDGEATLVGLACD-SAYRKFNVVLAGYHRMFGH-RPDGSF 178
Query: 182 VFSVYSSKTRSWRDSASGVSFNAQF--RLNDANGVYSNRAIHWFNKAAELSGDCTGGMYF 239
+ V+ S+ WR VSF +N V+ N A+HW L+ T +
Sbjct: 179 ICLVFDSELNKWR---KFVSFQDDHFTHMNKNQVVFVNNALHW------LTASSTYILVL 229
Query: 240 DIDARCLKELPMPLFDDSESESVNRNVKYFGESGGCLQLIIGIKETLKFDVFELKEDYS- 298
D+ +++ +P D + NR Y + GCL +I I E +++ LK+ +
Sbjct: 230 DLSCEVWRKMQLPY--DLICGTGNR--IYLLDFDGCLS-VIKISEAW-MNIWVLKDYWKD 283
Query: 299 AWSLIHSVNLNPTRVKFPEL 318
W ++ V+L R P +
Sbjct: 284 EWCMVDKVSLRCIRGMVPGI 303
>Glyma16g27870.1
Length = 330
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 34/292 (11%)
Query: 26 LPPKPLIQLKLVSKGWLILISDYRFRRSHYLR---HNPAALLLSNKYGPLPRSHILSFTT 82
LP K L++ K V K WL LISD F SH+ + HN +LL+ P +
Sbjct: 1 LPVKSLVRFKCVCKLWLSLISDPHFAISHFEQAAIHNERLVLLA------PCAREFRSID 54
Query: 83 TTATIRD------LDLDFLTNHIFRAKRVDTVVCSCNGVLLCRSATSHFICNPXXXXXXX 136
A++ D L LDFL + + ++ SC G +L S + NP
Sbjct: 55 FNASLHDNSASAALKLDFLPPKPYYVR----ILGSCRGFVLLDCCQSLHVWNP--STGVH 108
Query: 137 XXXPKQRSKNNQECAFY-----LAFDPSTSPHYEIVLLRIWGGVKPPFRCVFSVYSSKTR 191
P+ ++ + F+ +DPST H +V+ + +S
Sbjct: 109 KQVPRSPIVSDMDVRFFTFLYGFGYDPST--HDYLVVQASNNPSSDDYATRVEFFSLGAN 166
Query: 192 SWRDSASGVSFNAQFRLNDAN-GVYSNRAIHWFNKAAELSGDCTGGMYFDIDARCLKELP 250
+W++ G+ + +D G N A+HW +L + FD+ R E+P
Sbjct: 167 AWKE-IEGIHLSYMNYFHDVRVGSLLNGALHWITCRYDLLIHVV--VVFDLMERSFSEIP 223
Query: 251 MPLFDDSESESVNRNVKYFGESGGCLQL-IIGIKETLKFDVFELKEDYSAWS 301
+P+ D E + N G G CL + ++G + + V + + S+W+
Sbjct: 224 LPVDFDIE-YFYDYNFCQLGILGECLSICVVGYYCSTEIWVMKEYKVQSSWT 274
>Glyma1314s00200.1
Length = 339
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 121/305 (39%), Gaps = 40/305 (13%)
Query: 16 RDTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHYLRHNPAALLLSNKYGPLPRS 75
R+ IL +LP K L+ K V K W LISD F H+ P+
Sbjct: 3 RELTEKILIKLPVKSLVSFKCVRKEWNNLISDPEFAERHF------------NINPIKSL 50
Query: 76 HILSFTTTTATIRDLDLDFLTNHIFRAKRVDTVVCSCNGVLLCRSATSHFICNPXXXXXX 135
H ++ + L L FL + K + SC LL S S ++ NP
Sbjct: 51 H------DESSYQSLSLSFLGHR--HPKPCVQIKGSCRDFLLLESCRSLYLWNPSTGQNK 102
Query: 136 XXXXPKQRSKNNQECAFY----LAFDPSTSPHYEIVLLRIWGGVKPPFRCVFSVYSSKTR 191
S +F L +DP T Y +V++ P FSV K
Sbjct: 103 MIQWSSNVSFITPGDSFLFCHGLGYDPRTKD-YMVVVISFAEYDSPSHMECFSV---KEN 158
Query: 192 SWRDS--ASGVSFNAQFRLNDAN--GVYSNRAIHWFNKAAELSGDCTGGMYFDIDARCLK 247
+W A+ + + + N N G + N A+HW E + FD+ R
Sbjct: 159 AWIHIPLAADLHYKSCNLWNGRNLTGTFFNNALHWLVYKYEAYMHVV--LAFDLVGRTFS 216
Query: 248 ELPMPLFDDSESESVNRNVKYFGESGGCLQLIIGIKET-LKFDVFELKE--DYSAWSLIH 304
E+ +P ++ E + + FGES CL ++ +++ ++ELK+ D+++W+ +
Sbjct: 217 EIHVP--NEFEFYCLPHALNVFGES-LCLCVMREMEQVETSIQIWELKQYTDHTSWTKTN 273
Query: 305 SVNLN 309
++ +N
Sbjct: 274 TLIIN 278
>Glyma16g32770.1
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 31/251 (12%)
Query: 17 DTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHY-LRHNPAALLLSNKYGPLPRS 75
D ++ IL LP + +++ K + K W LIS F RSH+ L P L +
Sbjct: 4 DLITEILMMLPVRSILRFKCMCKLWFSLISHPEFARSHFALAATPTTRLYLSA-----ND 58
Query: 76 HILSFTTTTATIRDLD-LDFLTNHIFRA------KRVDTVVCSCNGVLLCRS---ATSHF 125
H + T A++ D + + N+ + R+ +V SC G +L + A +
Sbjct: 59 HQVECTDIEASLHDENSAKVVFNYPLPSPEDKYYNRMIDIVGSCRGFILLMTTSGALNFI 118
Query: 126 ICNPXXXXXXXXXXPKQRSKNN---QECAFYLAFDPSTSPHYEIVLLRIWGGVKPPFRCV 182
I NP N C F +D ST Y IV LRI +R
Sbjct: 119 IWNPSTGLRKGISYLMDDHIYNFYADRCGF--GYDSSTDD-YVIVNLRI-----EAWRTE 170
Query: 183 FSVYSSKTRSWRDSASGVSFNAQFRLNDANGVYSNRAIHWFNKAAELSGDCTGGMYFDID 242
+S +T SW + + L+ +GV+ N A+HWF + + + FD+
Sbjct: 171 VHCFSLRTNSWSRMLGTALY---YPLDLGHGVFFNGALHWFVRRCDGRRQAV-IISFDVT 226
Query: 243 ARCLKELPMPL 253
R L E+ +PL
Sbjct: 227 ERRLFEILLPL 237
>Glyma16g32800.1
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 97/258 (37%), Gaps = 47/258 (18%)
Query: 17 DTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHY-LRHNPAALLLSNKYGPLPRS 75
D ++ IL LP + +++ K + K W LIS F RSH+ L P L +
Sbjct: 12 DLITEILMMLPVRSILRFKCMCKSWFFLISHPEFARSHFALAATPTTRLYLSA-----ND 66
Query: 76 HILSFTTTTATIRDLDLDFLTNHIFR----------AKRVDTVVCSCNG---VLLCRSAT 122
H + T A++ D D +F R +V SC G +++ A
Sbjct: 67 HQVECTDIEASLHD---DNSAKVVFNYPLPSPEDKYYNRAIDIVGSCRGFILLMITSGAL 123
Query: 123 SHFICNPXXXXXXXXXXPKQRSKNN---QECAFYLAFDPSTSPHYEIVLLRIWGGVKPPF 179
I NP N C F +D ST Y IV L+I G
Sbjct: 124 DFIIWNPSTGLRKGISYVMDDHAYNFCDDRCGF--GYDSSTDD-YVIVKLKIDGWCTE-- 178
Query: 180 RCVFSVYSSKTRSWRDSASGVSFNAQFRLNDANGVYSNRAIHWFNKAAELSGDCTGG--- 236
+S +T SW + + ++ +G + N A+HWF + C G
Sbjct: 179 ---VHCFSLRTNSWSRILGTALY---YPVDLGHGAFFNGALHWFVRR------CNGRRQA 226
Query: 237 --MYFDIDARCLKELPMP 252
+ FD+ R L E+P+P
Sbjct: 227 VIISFDVTERGLFEIPLP 244
>Glyma10g34340.1
Length = 386
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 95/227 (41%), Gaps = 41/227 (18%)
Query: 17 DTLSAILFRLPPKPLIQLKLVSKGWLILISDYRFRRSHYLRHNPAALLL--SNK-YGPLP 73
+ L IL RLP K +++ V K W LIS+ F H RH+P+ LLL SNK + P
Sbjct: 10 EILVEILHRLPSKSILRCSAVCKSWRSLISNESFISLHR-RHSPSFLLLGFSNKLFLPHR 68
Query: 74 RSHILSFTTTTATIRDL----DLDFLTNHIFRAKRVDTVVCSCNGVLLCRSATSH----F 125
R H T + T+ L DL+F V+ CNG L+C +
Sbjct: 69 RHHHDPSLTLSYTLLRLPSFPDLEF------------PVLSFCNG-LICIAYGERCLPII 115
Query: 126 ICNPXXXXXXXXXXPKQRSKNNQECAFYLAFDPSTSPHYEIVLLRIWG-----GVKPPFR 180
ICNP P C L FD ST+ Y+++ + G+ P
Sbjct: 116 ICNPSIRRYVCLPTPHDYPCYYNSC-IALGFD-STNCDYKVIRISCIVDDESFGLSAP-- 171
Query: 181 CVFSVYSSKTRSWR--DSASGVSFNAQFRLNDANGVYSNRAIHWFNK 225
+ +YS K+ SWR D + V + A DA + + +HW K
Sbjct: 172 -LVELYSLKSGSWRILDGIAPVCYVA----GDAPHGFEDGLVHWVAK 213