Miyakogusa Predicted Gene

Lj1g3v4012760.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4012760.2 tr|G7KHU6|G7KHU6_MEDTR Frataxin OS=Medicago
truncatula GN=MTR_6g071700 PE=4 SV=1,67.61,2e-19,FRATAXIN_1,Frataxin
conserved site; Frataxin_Cyay,Frataxin/CyaY; seg,NULL;
FRATAXIN,Frataxin/CyaY; F,CUFF.31767.2
         (173 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g29700.1                                                       159   2e-39
Glyma03g00960.1                                                       147   4e-36

>Glyma19g29700.1 
          Length = 191

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/144 (56%), Positives = 97/144 (67%), Gaps = 1/144 (0%)

Query: 30  INGARLLSLKVSEIVGLFKGNALLXXXXXXXXXXXXXXXNLLDESEVPTAVDYRSLMEES 89
           I+ A +LS+K SE +  +K NALL               NL DES+ P  +DY SL++E 
Sbjct: 25  IHAAPILSVKASEFMFPYKENALLPPLSSSSRNFCSRSFNL-DESQGPLTIDYSSLLQEG 83

Query: 90  EYHSLAESTIHNLQEKLEXXXXXXXXXXXXXXXXXXVLTVKLGDLGTYVLNKQTPNRQIW 149
           E+H LA+STIH+LQEKLE                  VLT+KLGDLGTYVLNKQTPNRQ+W
Sbjct: 84  EFHRLADSTIHSLQEKLEDYGDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLW 143

Query: 150 LSSPVSGPSRFDWDQDTKAWIYRR 173
           LSSPVSGPSRFDWD+DTKAWIYRR
Sbjct: 144 LSSPVSGPSRFDWDRDTKAWIYRR 167


>Glyma03g00960.1 
          Length = 191

 Score =  147 bits (372), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 91/139 (65%), Gaps = 2/139 (1%)

Query: 35  LLSLKVSEIVGLFKGNALLXXXXXXXXXXXXXXXNLLDESEVPTAVDYRSLMEESEYHSL 94
           +LS K SE + L+  NALL                 L ES+ P  +DY SL++E E+H L
Sbjct: 31  ILSAKASEFMFLYNVNALLPPLSPSRNFCSRSFN--LHESQGPLTIDYSSLLQEGEFHRL 88

Query: 95  AESTIHNLQEKLEXXXXXXXXXXXXXXXXXXVLTVKLGDLGTYVLNKQTPNRQIWLSSPV 154
           A+STIH+LQEKLE                  VLT+KLGDLGTYVLNKQTPNRQ+WLSSP+
Sbjct: 89  ADSTIHSLQEKLEDYGDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPM 148

Query: 155 SGPSRFDWDQDTKAWIYRR 173
           SGPSRFDWD+DTKAWIYRR
Sbjct: 149 SGPSRFDWDRDTKAWIYRR 167