Miyakogusa Predicted Gene

Lj1g3v3981500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3981500.1 Non Chatacterized Hit- tr|I1KCU0|I1KCU0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,33.33,0.002,
,CUFF.31739.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g01040.1                                                       112   8e-26
Glyma19g29600.2                                                       110   4e-25
Glyma19g29600.1                                                       103   4e-23
Glyma06g20920.1                                                        50   6e-07
Glyma04g33420.1                                                        49   1e-06

>Glyma03g01040.1 
          Length = 93

 Score =  112 bits (281), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 3/95 (3%)

Query: 1  MEKKPFLKLLVILLGLSCFGYAVAVPATRSSMIWKVDPSILQDHLAKDDHVMGLRNNQGV 60
          ME K   +LLVILL L    +  AVPATRSSMI K+DP ++QDHLAK+D VM LRN++  
Sbjct: 1  MENKALFRLLVILLALFFVVFVAAVPATRSSMIGKIDP-LVQDHLAKEDLVMWLRNSED- 58

Query: 61 LEIKEEAVESRMLVDVADYPGTRPNPSHNPKPPAK 95
           E+KE  +E+RML+DV DYPGTRPNP+H PK P K
Sbjct: 59 -EMKEGTLETRMLMDVVDYPGTRPNPAHYPKSPGK 92


>Glyma19g29600.2 
          Length = 93

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 71/95 (74%), Gaps = 3/95 (3%)

Query: 1  MEKKPFLKLLVILLGLSCFGYAVAVPATRSSMIWKVDPSILQDHLAKDDHVMGLRNNQGV 60
          M+K    + L++LL LSC  +  AVPA RSSMI K+DP ++QD LAK+D VM LRN++  
Sbjct: 1  MDKNALFRFLLVLLTLSCVVFVAAVPAIRSSMIGKIDP-LVQDLLAKEDPVMRLRNSEE- 58

Query: 61 LEIKEEAVESRMLVDVADYPGTRPNPSHNPKPPAK 95
           E+KE  VESRML+D+ DYPGTRPNP+H+PK P K
Sbjct: 59 -EMKEGIVESRMLMDIVDYPGTRPNPAHDPKSPGK 92


>Glyma19g29600.1 
          Length = 102

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 12/104 (11%)

Query: 1   MEKKPFLKLLVILLGLSCFGYAVAVPATRSSMIWKVDPSILQDHLAK---------DDHV 51
           M+K    + L++LL LSC  +  AVPA RSSMI K+DP ++QD LAK         +D V
Sbjct: 1   MDKNALFRFLLVLLTLSCVVFVAAVPAIRSSMIGKIDP-LVQDLLAKVLSLSLSLQEDPV 59

Query: 52  MGLRNNQGVLEIKEEAVESRMLVDVADYPGTRPNPSHNPKPPAK 95
           M LRN++   E+KE  VESRML+D+ DYPGTRPNP+H+PK P K
Sbjct: 60  MRLRNSEE--EMKEGIVESRMLMDIVDYPGTRPNPAHDPKSPGK 101


>Glyma06g20920.1 
          Length = 92

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 9/96 (9%)

Query: 1  MEKKPFLKLLVILLGLSCFGYAVAVPATRSSMIWKVDPSILQ---DHLAKDDHVMGLRNN 57
          M+   F  L VILLGLS F    AVP TR+  + + +P +L    D++     + G++  
Sbjct: 1  MKSSLFHLLFVILLGLSHFACLKAVPVTRTESLMQ-EPKVLHHALDNIHNHKVITGIKWQ 59

Query: 58 QGVLEIKEEAVESRMLVDVADYPGTRPNPSHNPKPP 93
          Q     +E +   RM +++ DYP +  N  H PKPP
Sbjct: 60 Q-----EEPSFAERMDLELHDYPPSAANGRHTPKPP 90


>Glyma04g33420.1 
          Length = 92

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 11/97 (11%)

Query: 1  MEKKPFLKLLVILLGLSCFGYAVAVPATRSSMIWKVDPSILQDHLAKDDHVMGLRNNQGV 60
          M+   F  L VIL GLS F    AVP TR+  + + DP ++  H A D+    + N++ +
Sbjct: 1  MKGSLFHLLFVILFGLSHFVCLKAVPITRTESLMQ-DPKVI--HHALDN----IHNHKII 53

Query: 61 LEIKEEAVE----SRMLVDVADYPGTRPNPSHNPKPP 93
           EIK +  E     RM +++ DYP    N  H PKPP
Sbjct: 54 TEIKGQQEEPIFAERMDLELHDYPPYGANGHHTPKPP 90