Miyakogusa Predicted Gene

Lj1g3v3975890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975890.1 Non Chatacterized Hit- tr|I1IJ35|I1IJ35_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,47.17,2e-19,DDE_4,NULL; UNCHARACTERIZED,Harbinger
transposase-derived nuclease,gene.g35858.t1.1
         (177 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23150.2                                                       167   5e-42

>Glyma20g23150.2 
          Length = 402

 Score =  167 bits (423), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/205 (46%), Positives = 114/205 (55%), Gaps = 40/205 (19%)

Query: 1   MCLASTEPHNDVWLDHEKKHSMVLQAIVHPDMR--------------------------- 33
           M L S +  N VWLD EK  SMVLQAIV PD+R                           
Sbjct: 191 MTLPSVDALNSVWLDREKNCSMVLQAIVDPDLRFRDIVTGWPGSMSDEQVLRSSSFFKLA 250

Query: 34  -----LNGRIIHLPYESKIREYIIGDSGFPLLPYLIVPYERKEEKLLGVQADFNRRHFKM 88
                LNG    LP  +  REYIIGD+GFPL  +L+ PYE K      VQ +FN+R  + 
Sbjct: 251 EEGKRLNGGKKTLPDGTLFREYIIGDTGFPLFSWLLTPYEGK--GFSNVQVEFNKRVVET 308

Query: 89  QMVAQRALARLKEMWGIIQGTMWRPDKHRLPSIIHVCCILHNIVIDMGDEVQDEQLSNLP 148
           QMVA++ALARLK+MW IIQG MW+PDKH+LP II VCCILHNIVIDM DEV    L ++P
Sbjct: 309 QMVAKKALARLKDMWKIIQGVMWKPDKHKLPRIILVCCILHNIVIDMEDEV----LIDMP 364

Query: 149 I--NHDSGYHQLICGVEDTQGLLLR 171
               HDS Y        D    ++R
Sbjct: 365 SCHQHDSRYQDQTSEFADNTATIMR 389