Miyakogusa Predicted Gene

Lj1g3v3964650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3964650.1 Non Chatacterized Hit- tr|I3T8T8|I3T8T8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.21,0,HNH,HNH
endonuclease; HNH nucleases,HNH nuclease,CUFF.31585.1
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g28660.1                                                       422   e-118
Glyma16g04660.1                                                       146   2e-35
Glyma16g04650.1                                                       116   4e-26

>Glyma19g28660.1 
          Length = 288

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/291 (79%), Positives = 250/291 (85%), Gaps = 5/291 (1%)

Query: 27  MAQFTTHGRLKLLFNGEVGSSILEHNKDPFHYKCSRSALTRKRRPTRYMGSSAGGILRYA 86
           MAQFTT GRLKLL NGE  SS+LEH KDPF YKC RS  T KRR TRY GSSA  I   +
Sbjct: 1   MAQFTTQGRLKLLLNGEGVSSVLEH-KDPFLYKC-RSVQTHKRR-TRYAGSSAR-IYYAS 56

Query: 87  TSSMRNKANRCNAEARFTAGNEGVHDEYEYDSDGVEDFDYEDDVFG-FDGDGLSCFRGLV 145
           TSS+ +K++RCNAEAR T+GN  VHDEY+   D  ++ D E++    FD DGLSCFRGLV
Sbjct: 57  TSSLSSKSHRCNAEARHTSGNGSVHDEYDDIDDDEDEDDEEEEEEDVFDRDGLSCFRGLV 116

Query: 146 LDLAYRPVNVVCWKRAICLEFMEKADVLEYYEKTVNSPSGSFYIPAVLRVPHLLQVVKRR 205
           LD+AYRPVNVV WKRAICLEFMEKADVLEYY KTVNSPSGSFYIPAVLRVPHLLQVVKRR
Sbjct: 117 LDIAYRPVNVVGWKRAICLEFMEKADVLEYYAKTVNSPSGSFYIPAVLRVPHLLQVVKRR 176

Query: 206 IVKNNLSRKNILFRDHFTCQYCSSRENLTIDHVVPAALGGEWTWENLVTACAKCNSKKGK 265
           I+KNNLSRKNILFRD++TCQYCSS ENLTIDHVVPAALGGEWTWENLVTACAKCN KKG+
Sbjct: 177 IIKNNLSRKNILFRDNYTCQYCSSHENLTIDHVVPAALGGEWTWENLVTACAKCNCKKGR 236

Query: 266 KSLEEAKMKLNKVPKAPKEYDILAIPLTAAALRMLSKRKGTPEEWRQYLRS 316
           K+LEEAKMKL K PK PK+YDILAIPLTAAALRML+ RKGTPEEWRQYLRS
Sbjct: 237 KTLEEAKMKLIKPPKVPKDYDILAIPLTAAALRMLTIRKGTPEEWRQYLRS 287


>Glyma16g04660.1 
          Length = 79

 Score =  146 bits (369), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/78 (85%), Positives = 72/78 (92%)

Query: 239 VPAALGGEWTWENLVTACAKCNSKKGKKSLEEAKMKLNKVPKAPKEYDILAIPLTAAALR 298
           +P ALGGEWTWENLVTACAKCN KKG+K+LEEAKMKL K PK PK+YDILAIPLTAAALR
Sbjct: 1   MPTALGGEWTWENLVTACAKCNCKKGRKTLEEAKMKLIKPPKVPKDYDILAIPLTAAALR 60

Query: 299 MLSKRKGTPEEWRQYLRS 316
           ML+ RKGTPEEWRQYLRS
Sbjct: 61  MLTLRKGTPEEWRQYLRS 78


>Glyma16g04650.1 
          Length = 130

 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 90/136 (66%), Gaps = 14/136 (10%)

Query: 27  MAQFTTHGRLKLLFNGEVGSSILEHNKDPFHYKCSRSALTRKRRPTRYMGSSAGGILRYA 86
           MAQFTT GRLKLLFNGE  SS+LEHNKDPF Y   RS  T KRR TR +GSSA   + Y 
Sbjct: 1   MAQFTTQGRLKLLFNGEGVSSVLEHNKDPFLYNKCRSVQTHKRRTTRCIGSSAR--IYYV 58

Query: 87  TSSMRNKANRCNAEARFTAGNEGVHDEYEYDSDGVEDFDYEDDVFGFDGDGLSCFRGLVL 146
           +SS+ NK + CNAEA  T+GN  VHDEY+ D +  +D  ++        DGLSCFRGLVL
Sbjct: 59  SSSLSNKTHLCNAEAWLTSGNGSVHDEYDDDVEDDDDDVFDR-------DGLSCFRGLVL 111

Query: 147 DLAYR-----PVNVVC 157
           D+AY        +VVC
Sbjct: 112 DIAYSHQYQDTCSVVC 127