Miyakogusa Predicted Gene
- Lj1g3v3961390.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3961390.2 tr|G7JG99|G7JG99_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_4g082150 PE=,93.36,0,E3
UBIQUITIN LIGASE APC2,NULL; CULLIN,NULL; Cullin,Cullin, N-terminal; no
description,NULL; seg,NULL,CUFF.31583.2
(227 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g04130.1 397 e-111
Glyma11g34170.1 395 e-110
Glyma10g08060.1 250 9e-67
Glyma04g27680.1 97 1e-20
Glyma09g05180.1 56 4e-08
Glyma17g02800.2 56 4e-08
Glyma07g37850.1 56 4e-08
Glyma17g02800.1 56 4e-08
Glyma15g16470.1 55 4e-08
Glyma15g16470.3 55 5e-08
Glyma15g16470.2 55 5e-08
Glyma19g39610.1 55 7e-08
Glyma03g36960.3 55 8e-08
Glyma03g36960.2 55 8e-08
Glyma03g36960.1 55 8e-08
Glyma15g10030.1 48 7e-06
Glyma15g10030.2 48 9e-06
>Glyma18g04130.1
Length = 876
Score = 397 bits (1019), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/208 (92%), Positives = 202/208 (97%)
Query: 20 LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
LLEELNRDEEIQEN GVDDDFNTDDR+AWINA RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 486 LLEELNRDEEIQENAGVDDDFNTDDRQAWINAMRWQPDPVEADPLKGSRNQRKVDILGMI 545
Query: 80 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
VGIIGSKDQLVHEYRTMLAEKLLNKS+YDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 546 VGIIGSKDQLVHEYRTMLAEKLLNKSNYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 605
Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
GSKRINSNIKATI+QPSQT+VE+ D+AISMD I+ATIISSNFWPPIQ EPLNLPEPVD+L
Sbjct: 606 GSKRINSNIKATINQPSQTSVELGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQL 665
Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
LSDYAKRFNEIKTPRKL WKKSLGT+K+
Sbjct: 666 LSDYAKRFNEIKTPRKLLWKKSLGTIKL 693
>Glyma11g34170.1
Length = 884
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/208 (92%), Positives = 200/208 (96%), Gaps = 1/208 (0%)
Query: 20 LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
LLEELNRDEEIQEN GVDD FNTDDR+AWINA RWQPDPVEADPLKGSRNQRKVDILGMI
Sbjct: 495 LLEELNRDEEIQENAGVDD-FNTDDRQAWINAMRWQPDPVEADPLKGSRNQRKVDILGMI 553
Query: 80 VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
V IIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI
Sbjct: 554 VSIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 613
Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
GSKR NSNIKATI+QPSQT+VEV DNAISMD I+ATIISSNFWPPIQ EPLNLPEPVD+L
Sbjct: 614 GSKRTNSNIKATINQPSQTSVEVGDNAISMDAISATIISSNFWPPIQDEPLNLPEPVDQL 673
Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKV 227
LSDYAKRFNEIKTPRKLQWKKSLGT+K+
Sbjct: 674 LSDYAKRFNEIKTPRKLQWKKSLGTIKL 701
>Glyma10g08060.1
Length = 450
Score = 250 bits (638), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 130/165 (78%), Positives = 136/165 (82%), Gaps = 15/165 (9%)
Query: 23 ELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMIVGI 82
ELNRDEEIQEN G F SRWQP PVEADPLKGS+ QRKVDILGMIV I
Sbjct: 277 ELNRDEEIQENAGASMAF----------PSRWQPGPVEADPLKGSKKQRKVDILGMIVSI 326
Query: 83 IGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSK 142
IGSKDQLVHEYRTMLAEKLLNKSDYDIDSEI TLELLK SS QKCEIMLNDLIGSK
Sbjct: 327 IGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIHTLELLK-----SSPQKCEIMLNDLIGSK 381
Query: 143 RINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQV 187
R NSNIKATI++PSQT+VEV DNAISMD I+ATIISSNFWPP+QV
Sbjct: 382 RTNSNIKATINRPSQTSVEVGDNAISMDAISATIISSNFWPPMQV 426
>Glyma04g27680.1
Length = 224
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 20 LLEELNRDEEIQENVGVDDDFNTDDREAWINA-SRWQPDPVEADPLKGSRNQRKVDILGM 78
LLEELNRDEEIQEN VDDDFNTDDR+A +NA RWQ DP+EADPLKGS+NQRKVDILGM
Sbjct: 154 LLEELNRDEEIQENSDVDDDFNTDDRQARVNAMRRWQTDPMEADPLKGSKNQRKVDILGM 213
Query: 79 IVGIIGSKDQL 89
IV IIGSKDQL
Sbjct: 214 IVSIIGSKDQL 224
>Glyma09g05180.1
Length = 744
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
+K ++ + +S NA ++ T++++ FWP + LNLP + +
Sbjct: 485 TLAKENQTSFEEYLSN--------NPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVR 536
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + K F + KT RKL W SLGT +
Sbjct: 537 CVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 565
>Glyma17g02800.2
Length = 592
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
+K ++ + +S NA ++ T++++ FWP + LNLP + +
Sbjct: 485 TLAKENQTSFEEYLSN--------NPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIR 536
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + K F + KT RKL W SLGT +
Sbjct: 537 CVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 565
>Glyma07g37850.1
Length = 744
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
+K ++ + +S NA ++ T++++ FWP + LNLP + +
Sbjct: 485 TLAKENQTSFEEYLSN--------NPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIR 536
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + K F + KT RKL W SLGT +
Sbjct: 537 CVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 565
>Glyma17g02800.1
Length = 744
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
+K ++ + +S NA ++ T++++ FWP + LNLP + +
Sbjct: 485 TLAKENQTSFEEYLSN--------NPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIR 536
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + K F + KT RKL W SLGT +
Sbjct: 537 CVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 565
>Glyma15g16470.1
Length = 744
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 425 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 484
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
+K ++ + + TN D I ++ T++++ FWP + LNLP + +
Sbjct: 485 TLAKENQTSFEEYL-----TNNPNADPGI---DLTVTVLTTGFWPSYKSFDLNLPAEMVR 536
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + K F + KT RKL W SLGT +
Sbjct: 537 CVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 565
>Glyma15g16470.3
Length = 693
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 374 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 433
Query: 139 IGSKRINSNIKATISQPSQTNVEV----EDNAISMDNIAATIISSNFWPPIQVEPLNLPE 194
T+++ +QT+ E NA ++ T++++ FWP + LNLP
Sbjct: 434 ------------TLAKENQTSFEEYLTNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPA 481
Query: 195 PVDKLLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + + + K F + KT RKL W SLGT +
Sbjct: 482 EMVRCVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 514
>Glyma15g16470.2
Length = 693
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 374 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 433
Query: 139 IGSKRINSNIKATISQPSQTNVEV----EDNAISMDNIAATIISSNFWPPIQVEPLNLPE 194
T+++ +QT+ E NA ++ T++++ FWP + LNLP
Sbjct: 434 ------------TLAKENQTSFEEYLTNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPA 481
Query: 195 PVDKLLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
+ + + + K F + KT RKL W SLGT +
Sbjct: 482 EMVRCVEVF-KEFYQTKTKHRKLTWIYSLGTCNI 514
>Glyma19g39610.1
Length = 730
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 411 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHEKCILTKLKQQCGGQFTSKMEGMVVDL 470
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
++ + + S N + ++ T++++ FWP + LNLP + +
Sbjct: 471 TLARDNQLKFEEYLRDNSHVNPGI--------DLTVTVLTTGFWPSYKSFDLNLPSEMIR 522
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
L + K F E +T RKL W SLGT V
Sbjct: 523 CLEVF-KGFYETRTKHRKLTWIYSLGTCHV 551
>Glyma03g36960.3
Length = 734
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 415 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHEKCILTKLKQQCGGQFTSKMEGMVVDL 474
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
++ + + S N + ++ T++++ FWP + LNLP + +
Sbjct: 475 TLARDNQLKFEEYLRDNSHVNPGI--------DLTVTVLTTGFWPSYKSFDLNLPSEMIR 526
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
L + K F E +T RKL W SLGT V
Sbjct: 527 CLEVF-KGFYETRTKHRKLTWIYSLGTCHV 555
>Glyma03g36960.2
Length = 734
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 415 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHEKCILTKLKQQCGGQFTSKMEGMVVDL 474
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
++ + + S N + ++ T++++ FWP + LNLP + +
Sbjct: 475 TLARDNQLKFEEYLRDNSHVNPGI--------DLTVTVLTTGFWPSYKSFDLNLPSEMIR 526
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
L + K F E +T RKL W SLGT V
Sbjct: 527 CLEVF-KGFYETRTKHRKLTWIYSLGTCHV 555
>Glyma03g36960.1
Length = 734
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 79 IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
++ I KD YR LA +LL + D E L LK G K E M+ DL
Sbjct: 415 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHEKCILTKLKQQCGGQFTSKMEGMVVDL 474
Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
++ + + S N + ++ T++++ FWP + LNLP + +
Sbjct: 475 TLARDNQLKFEEYLRDNSHVNPGI--------DLTVTVLTTGFWPSYKSFDLNLPSEMIR 526
Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKV 227
L + K F E +T RKL W SLGT V
Sbjct: 527 CLEVF-KGFYETRTKHRKLTWIYSLGTCHV 555
>Glyma15g10030.1
Length = 788
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 73 VDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCE 132
+D + ++ I KD Y+ LA++LL ID+E + LK G K E
Sbjct: 461 LDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLE 520
Query: 133 IMLNDLIGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNL 192
M D+ SK IN + K Q SQ ++ + I M + ++++ +WP + L
Sbjct: 521 GMFKDIELSKEINESFK----QSSQARTKL-PSGIEM---SVHVLTTGYWPTYPPMDVRL 572
Query: 193 PEPVDKLLSDYAKRFNEIK-TPRKLQWKKSLG 223
P ++ + D K F K + R+L W+ SLG
Sbjct: 573 PHELN-VYQDIFKEFYLSKYSGRRLMWQNSLG 603
>Glyma15g10030.2
Length = 766
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 73 VDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCE 132
+D + ++ I KD Y+ LA++LL ID+E + LK G K E
Sbjct: 461 LDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLE 520
Query: 133 IMLNDLIGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNL 192
M D+ SK IN + K Q SQ ++ + I M + ++++ +WP + L
Sbjct: 521 GMFKDIELSKEINESFK----QSSQARTKL-PSGIEM---SVHVLTTGYWPTYPPMDVRL 572
Query: 193 PEPVDKLLSDYAKRFNEIK-TPRKLQWKKSLG 223
P ++ + D K F K + R+L W+ SLG
Sbjct: 573 PHELN-VYQDIFKEFYLSKYSGRRLMWQNSLG 603