Miyakogusa Predicted Gene

Lj1g3v3948260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3948260.1 tr|Q4RFZ2|Q4RFZ2_TETNG Chromosome undetermined
SCAF15108, whole genome shotgun sequence
OS=Tetraodon,35.86,2e-18,RRM_1,RNA recognition motif domain;
RNA-binding domain, RBD,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARAC,CUFF.31696.1
         (445 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g04710.1                                                       632   0.0  
Glyma19g28530.1                                                       528   e-150

>Glyma16g04710.1 
          Length = 456

 Score =  632 bits (1629), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/456 (72%), Positives = 353/456 (77%), Gaps = 13/456 (2%)

Query: 1   MAESQFGFQSTGT--TMAESNPSATLIIKHLPEAIPHDTLSRLLSHYNASSVRPCSAARL 58
           MA SQF FQ T +    AES    TL+IKHLPEAIPHDTLSR+ +++ AS VRPCS+ARL
Sbjct: 1   MACSQFAFQGTESKPCDAESAVPVTLLIKHLPEAIPHDTLSRIFANFGASFVRPCSSARL 60

Query: 59  RNCAFVDFKNDMLASQAQRQLNGLRFLGKVLSAERA-NPIDNGEKSSGAQQGXXXXXXXX 117
           RNCAF DFKN+++ASQAQRQLNGLRFLGKVLSAERA NP +NGEKSSG Q G        
Sbjct: 61  RNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERASNPTENGEKSSGDQLGKDPKTSML 120

Query: 118 XXXXXXX---EDTKSAGLPTPQPIADRLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAV 174
                      DTKS GLP P+PIADRLGV+YPFPPHLEYAYPPPDGNILTNIVNALIAV
Sbjct: 121 MNANVTKPIDGDTKSGGLPIPEPIADRLGVNYPFPPHLEYAYPPPDGNILTNIVNALIAV 180

Query: 175 PRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXTAKPQXXXXXXXX 234
           PRFYTQVLHLMNKMNIPAPFRMAL                       T  P+        
Sbjct: 181 PRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPALPPPPPAPTV--TVNPRSADLSSGE 238

Query: 235 XXXXXXXXXXGAR-----RKRARRETIVGPAIDKDVAHESVGVKPATLVPKEIPMIKKNP 289
                      AR     +KRARRETIVGPAIDK VAHESVGVKPATLVPKEIP+IKKN 
Sbjct: 239 SEMESSDEEVEARTKKSGQKRARRETIVGPAIDKGVAHESVGVKPATLVPKEIPVIKKNH 298

Query: 290 VLKIKIAPKATLNEHKDDDTKQDLQEPENDIPDTNKFLTPDELERGKLPPEEILSLPMFK 349
           VLKI I PKAT+ EHKDDDT Q+LQEPE D+PD NKF TPDELERGKLPPEEILSLPMFK
Sbjct: 299 VLKINIVPKATVKEHKDDDTTQELQEPEKDVPDPNKFFTPDELERGKLPPEEILSLPMFK 358

Query: 350 NYTPGNPAPVLYIKNLAKDVIADDFYFIFGSLFGNIEDAKSGLQVKLMQEGRMRGQAFLT 409
           NYT GNPAPVLYIKNLAKDVIADDFYFIFGSLFG+IE AKSGLQVKLMQEGRMRGQAF+T
Sbjct: 359 NYTAGNPAPVLYIKNLAKDVIADDFYFIFGSLFGSIEAAKSGLQVKLMQEGRMRGQAFIT 418

Query: 410 FPSTELAHHALNLVNGHVFKGKPMIIQFGRNPAAAK 445
           FPS ELAHHALNLVNG+V KGKPMIIQFGRNPAAAK
Sbjct: 419 FPSIELAHHALNLVNGYVLKGKPMIIQFGRNPAAAK 454


>Glyma19g28530.1 
          Length = 374

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 276/378 (73%), Positives = 292/378 (77%), Gaps = 29/378 (7%)

Query: 58  LRNCAFVDFKNDMLASQAQRQLNGLRFLGKVLSAERA-NPIDNGEKSSGAQQGXXXXXXX 116
           LRNCAF DFKN+++ASQAQRQLNGLRFLGKVLSAERA NP +NGEKSSG Q G       
Sbjct: 19  LRNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERASNPTENGEKSSGDQLGKDSKTSM 78

Query: 117 XXXXXXXX---EDTKSAGLPTPQPIADRLGVDYPFPPHLEYAYPPPDGNILTNIVNALIA 173
                       DTKS  LP P+PIADRLGV+YPFPPHLEYAYPPPDGNILTNIVNALIA
Sbjct: 79  LKNANVTKPIDGDTKSGALPIPEPIADRLGVNYPFPPHLEYAYPPPDGNILTNIVNALIA 138

Query: 174 VPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXTAKPQXXXXXXX 233
           VPRFYTQVLHLMNKMNIPAPFRMAL                          P        
Sbjct: 139 VPRFYTQVLHLMNKMNIPAPFRMAL-----------------------PTPPLPPEMESS 175

Query: 234 XXXXXXXXXXXGARRKRARRETIVGPAIDKDVAHESVGVKPATLVPKEIPMIKKNPVLKI 293
                      G  +KRARRETIVGPAIDK VAHESVGVKPATLVPKEIP+IKKN VLKI
Sbjct: 176 DEEDEARIRKSG--QKRARRETIVGPAIDKGVAHESVGVKPATLVPKEIPVIKKNHVLKI 233

Query: 294 KIAPKATLNEHKDDDTKQDLQEPENDIPDTNKFLTPDELERGKLPPEEILSLPMFKNYTP 353
            I PKAT+ EHKDDDT Q+LQEPE D+PD NKFLTPDELERGKLPPEEILSLPMFKNYT 
Sbjct: 234 NIVPKATVKEHKDDDTTQELQEPEKDVPDPNKFLTPDELERGKLPPEEILSLPMFKNYTA 293

Query: 354 GNPAPVLYIKNLAKDVIADDFYFIFGSLFGNIEDAKSGLQVKLMQEGRMRGQAFLTFPST 413
           GNPAPVLYIKNLAKDVIADDFYFIFGSLFG+I+ AKSGLQVKLMQEGRMRGQAF+TFPS 
Sbjct: 294 GNPAPVLYIKNLAKDVIADDFYFIFGSLFGSIDAAKSGLQVKLMQEGRMRGQAFITFPSI 353

Query: 414 ELAHHALNLVNGHVFKGK 431
           ELAHHALNLVNG+V KG+
Sbjct: 354 ELAHHALNLVNGYVLKGR 371