Miyakogusa Predicted Gene

Lj1g3v3948040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3948040.1 Non Chatacterized Hit- tr|H0VB73|H0VB73_CAVPO
Uncharacterized protein OS=Cavia porcellus
GN=LOC10072,34.68,1e-18,seg,NULL; tRNA-intron endonuclease catalytic
domain-like,tRNA intron endonuclease, catalytic domain-,CUFF.31554.1
         (241 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g08440.2                                                       367   e-102
Glyma10g08440.1                                                       367   e-102
Glyma04g36310.2                                                       365   e-101
Glyma04g36310.1                                                       365   e-101
Glyma19g32560.1                                                       248   5e-66

>Glyma10g08440.2 
          Length = 255

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/242 (73%), Positives = 193/242 (79%), Gaps = 2/242 (0%)

Query: 1   MAPRWXXXXXXXXXXXXXXXXXXPMSKTISHLQSSLVQSDACGFLSDNSVHLAVGAEQID 60
           MAPRW                  PMSK +S LQSSLVQS+ CGFLS +SVHLAVGAEQ+ 
Sbjct: 1   MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQLQSSLVQSNTCGFLSGSSVHLAVGAEQLH 60

Query: 61  LFDKACFGQPVRTVEKDQHLFQLSFEEAFFLCCSLKCLKIIRG--DLGPQNDEELWHYMK 118
           L DKACFG PVRTVEKD+  FQLSFEEAF+LC SLKCLKI     D  PQN EELWHYMK
Sbjct: 61  LLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSPQNSEELWHYMK 120

Query: 119 SKKEAFPCFYKAYSHLRMKNWVVKSGAQYGVDFVVYRHHPARIHSEYGILVLSDEDKKDL 178
           SKKE FPCFYKAYSHLRMKNWVV+SGAQYG DFVVY HHPAR+HSEYG+LVLSD + KDL
Sbjct: 121 SKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYCHHPARVHSEYGVLVLSDGEDKDL 180

Query: 179 NGRLGVWSDAHCITRLLGSVAKILLVMYVNKNGSSDESPSCLANYSVEERTIARWSPELC 238
           NGRL VWSD HC TRLLG VAKILLV+YVN+NGSS+ESP CLANY++EE TI RW+PE C
Sbjct: 181 NGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGSSNESPLCLANYTIEEHTITRWNPEQC 240

Query: 239 RE 240
           RE
Sbjct: 241 RE 242


>Glyma10g08440.1 
          Length = 255

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/242 (73%), Positives = 193/242 (79%), Gaps = 2/242 (0%)

Query: 1   MAPRWXXXXXXXXXXXXXXXXXXPMSKTISHLQSSLVQSDACGFLSDNSVHLAVGAEQID 60
           MAPRW                  PMSK +S LQSSLVQS+ CGFLS +SVHLAVGAEQ+ 
Sbjct: 1   MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQLQSSLVQSNTCGFLSGSSVHLAVGAEQLH 60

Query: 61  LFDKACFGQPVRTVEKDQHLFQLSFEEAFFLCCSLKCLKIIRG--DLGPQNDEELWHYMK 118
           L DKACFG PVRTVEKD+  FQLSFEEAF+LC SLKCLKI     D  PQN EELWHYMK
Sbjct: 61  LLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSPQNSEELWHYMK 120

Query: 119 SKKEAFPCFYKAYSHLRMKNWVVKSGAQYGVDFVVYRHHPARIHSEYGILVLSDEDKKDL 178
           SKKE FPCFYKAYSHLRMKNWVV+SGAQYG DFVVY HHPAR+HSEYG+LVLSD + KDL
Sbjct: 121 SKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYCHHPARVHSEYGVLVLSDGEDKDL 180

Query: 179 NGRLGVWSDAHCITRLLGSVAKILLVMYVNKNGSSDESPSCLANYSVEERTIARWSPELC 238
           NGRL VWSD HC TRLLG VAKILLV+YVN+NGSS+ESP CLANY++EE TI RW+PE C
Sbjct: 181 NGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGSSNESPLCLANYTIEEHTITRWNPEQC 240

Query: 239 RE 240
           RE
Sbjct: 241 RE 242


>Glyma04g36310.2 
          Length = 255

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/242 (72%), Positives = 191/242 (78%), Gaps = 2/242 (0%)

Query: 1   MAPRWXXXXXXXXXXXXXXXXXXPMSKTISHLQSSLVQSDACGFLSDNSVHLAVGAEQID 60
           MAPRW                  PMSK +S +QSSLVQSD  GFLS +SVHL V AEQ+ 
Sbjct: 1   MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQIQSSLVQSDTRGFLSGSSVHLVVEAEQLH 60

Query: 61  LFDKACFGQPVRTVEKDQHLFQLSFEEAFFLCCSLKCLKIIRG--DLGPQNDEELWHYMK 118
           L DKACFG PVRTVEKD+  FQLSFEEAF+LC SLKCLKI     D   Q DEELWHYMK
Sbjct: 61  LLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSSQTDEELWHYMK 120

Query: 119 SKKEAFPCFYKAYSHLRMKNWVVKSGAQYGVDFVVYRHHPARIHSEYGILVLSDEDKKDL 178
           SKKE FPCFYKAYSHLRMKNWVV+SGAQYG DFVVYRHHPAR+HSEYG+LVLSDE+ KDL
Sbjct: 121 SKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYRHHPARVHSEYGVLVLSDEEDKDL 180

Query: 179 NGRLGVWSDAHCITRLLGSVAKILLVMYVNKNGSSDESPSCLANYSVEERTIARWSPELC 238
           NGRL VWSD HC TRLLG VAKILLV+YVN+NG S+ESP CLANY+VEERTI RW+PE C
Sbjct: 181 NGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGGSNESPLCLANYTVEERTITRWNPEQC 240

Query: 239 RE 240
           RE
Sbjct: 241 RE 242


>Glyma04g36310.1 
          Length = 255

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/242 (72%), Positives = 191/242 (78%), Gaps = 2/242 (0%)

Query: 1   MAPRWXXXXXXXXXXXXXXXXXXPMSKTISHLQSSLVQSDACGFLSDNSVHLAVGAEQID 60
           MAPRW                  PMSK +S +QSSLVQSD  GFLS +SVHL V AEQ+ 
Sbjct: 1   MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQIQSSLVQSDTRGFLSGSSVHLVVEAEQLH 60

Query: 61  LFDKACFGQPVRTVEKDQHLFQLSFEEAFFLCCSLKCLKIIRG--DLGPQNDEELWHYMK 118
           L DKACFG PVRTVEKD+  FQLSFEEAF+LC SLKCLKI     D   Q DEELWHYMK
Sbjct: 61  LLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSSQTDEELWHYMK 120

Query: 119 SKKEAFPCFYKAYSHLRMKNWVVKSGAQYGVDFVVYRHHPARIHSEYGILVLSDEDKKDL 178
           SKKE FPCFYKAYSHLRMKNWVV+SGAQYG DFVVYRHHPAR+HSEYG+LVLSDE+ KDL
Sbjct: 121 SKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYRHHPARVHSEYGVLVLSDEEDKDL 180

Query: 179 NGRLGVWSDAHCITRLLGSVAKILLVMYVNKNGSSDESPSCLANYSVEERTIARWSPELC 238
           NGRL VWSD HC TRLLG VAKILLV+YVN+NG S+ESP CLANY+VEERTI RW+PE C
Sbjct: 181 NGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGGSNESPLCLANYTVEERTITRWNPEQC 240

Query: 239 RE 240
           RE
Sbjct: 241 RE 242


>Glyma19g32560.1 
          Length = 199

 Score =  248 bits (632), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 132/232 (56%), Positives = 149/232 (64%), Gaps = 33/232 (14%)

Query: 1   MAPRWXXXXXXXXXXXXXXXXXXPMSKTISHLQSSLVQSDACGFLSDNSVHLAVGAEQID 60
           MAPRW                  PMSK +S LQSSLVQ D  GFLS NSVHL V  EQ +
Sbjct: 1   MAPRWKGKDAKAKKDAEAEALKEPMSKMVSQLQSSLVQFDTRGFLSGNSVHL-VAVEQNN 59

Query: 61  LFDKACFGQPVRTVEKDQHLFQLSFEEAFFLCCSLKCLKIIRGDLGPQNDEELWHYMKSK 120
           L                             +C     L     D GPQND+EL HYMKSK
Sbjct: 60  L-----------------------------ICSKQHALD---HDTGPQNDQELGHYMKSK 87

Query: 121 KEAFPCFYKAYSHLRMKNWVVKSGAQYGVDFVVYRHHPARIHSEYGILVLSDEDKKDLNG 180
           KE F CFYKA+S L+MKNWVV+ GAQYG DFVV+R+HP+R+HSEYG+LVLSD D KDLNG
Sbjct: 88  KETFLCFYKAHSLLKMKNWVVRPGAQYGADFVVHRYHPSRVHSEYGVLVLSDGDDKDLNG 147

Query: 181 RLGVWSDAHCITRLLGSVAKILLVMYVNKNGSSDESPSCLANYSVEERTIAR 232
           RL VWSD HC TRLLGSV KILLV+YVNKN +++ESP CLANY+VEERTI R
Sbjct: 148 RLRVWSDVHCTTRLLGSVTKILLVLYVNKNDNNNESPLCLANYTVEERTITR 199