Miyakogusa Predicted Gene

Lj1g3v3918170.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918170.2 tr|G7K407|G7K407_MEDTR Chitinase
domain-containing protein OS=Medicago truncatula GN=MTR_5g025480
PE,78.38,0,Glyco_hydro_18,Glycoside hydrolase, family 18, catalytic
domain; no description,Glycoside hydrolase,,CUFF.31507.2
         (433 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g41760.1                                                       685   0.0  
Glyma19g44400.1                                                       236   3e-62

>Glyma03g41760.1 
          Length = 418

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/437 (80%), Positives = 369/437 (84%), Gaps = 23/437 (5%)

Query: 1   MAKKRDHRSAPSSGHRENRFQPPSRRNQRTDSTASSRSKLIALFIVSSVIAIVAYW--LR 58
           MAKKR   SAPS G RENR +  SRR     ++AS R KL+A FIVSS+IAIV Y    R
Sbjct: 1   MAKKR---SAPSGGRRENRAESSSRRL----NSASGRRKLVAFFIVSSIIAIVTYRYRFR 53

Query: 59  QSSPSQSKHKESYVYQRGLVTTDANYQDIVTENSNVPENSSHRHYTYPVLGYITPWNSRG 118
           QSSPSQ           GLVTT AN Q I+ ENS V  NSS RHYTYPVLGYITPWNSRG
Sbjct: 54  QSSPSQ-----------GLVTTHANCQHILAENSKVSGNSSQRHYTYPVLGYITPWNSRG 102

Query: 119 YELAKRFNSKFTHLSPVWYDLKSQQSSLVLEGRHNADRGWISDLRKAGEALILPRFVLEA 178
           YELAKRFNSKFTHLSP+WYDLKSQQ+SLVLEGRHNADRGWIS+L+KAGEALILPR VLEA
Sbjct: 103 YELAKRFNSKFTHLSPIWYDLKSQQTSLVLEGRHNADRGWISELKKAGEALILPRVVLEA 162

Query: 179 SPAELLGKKKQRNKAINLIVTECKEMGYDGIVLESWSRWAAFGILHDPDMRNLALQFVQQ 238
           SPA LLGK+KQRNKAINLIVTECKEMGYDGIVLESWSRWAA+GILHDP MRNLALQFV+Q
Sbjct: 163 SPAVLLGKEKQRNKAINLIVTECKEMGYDGIVLESWSRWAAYGILHDPSMRNLALQFVKQ 222

Query: 239 LGDALHSISSEKNSGQPLQLVYVIGPPSSEKLQEHDFGPRDLETLSGAVDGFSLMTYDFS 298
           LGDALHSISSEK SGQ LQLVYVIG P SEKLQEHDFGP+DLETLS AVDGFSLMTYDFS
Sbjct: 223 LGDALHSISSEKISGQQLQLVYVIGSP-SEKLQEHDFGPKDLETLSEAVDGFSLMTYDFS 281

Query: 299 NPHNPGPNAPLKWXXXXXXXXXGTSSSRAQSVAPKILLGINFYGNDFSLSK--DSGGGAI 356
           NPHNPGPNAPLKW         GTS +RAQS+APKILLGINFYGNDFSLS+  D+GGGAI
Sbjct: 282 NPHNPGPNAPLKWIQIVLQLLLGTSGNRAQSLAPKILLGINFYGNDFSLSRDADAGGGAI 341

Query: 357 TGRDYLALLEKHRPLLQWDNNSGEHVFFYTDDKGIKHAVFYPSLKSISLRLEEAHSWGCG 416
            GRDYLALLEKH P LQWD NSGEH FFYTDDK I+H VFYPSLKSISLRLEEA SWGCG
Sbjct: 342 IGRDYLALLEKHWPELQWDKNSGEHFFFYTDDKDIRHVVFYPSLKSISLRLEEARSWGCG 401

Query: 417 ISIWEIGQGLDYFFDLL 433
           ISIWEIGQGLDYFFDLL
Sbjct: 402 ISIWEIGQGLDYFFDLL 418


>Glyma19g44400.1 
          Length = 194

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 115/150 (76%), Positives = 124/150 (82%), Gaps = 6/150 (4%)

Query: 290 FSLMTYDFSNPHNPGPNAPLKWXXXXXXXXXGTSSSRAQSVAPKILLGINFYGNDFSLSK 349
           FSLMTYDFSNPHNPGPNAP+KW         GTS++R QS+APKILLGI+FYGNDFSLS+
Sbjct: 45  FSLMTYDFSNPHNPGPNAPMKWIQIVLQLLLGTSANRTQSLAPKILLGIDFYGNDFSLSR 104

Query: 350 ------DSGGGAITGRDYLALLEKHRPLLQWDNNSGEHVFFYTDDKGIKHAVFYPSLKSI 403
                 D+GGGAI GRDYLALLEKHRP LQWD NSGEH FFYTD+K I+HAVFYPS KSI
Sbjct: 105 EKVESADAGGGAIIGRDYLALLEKHRPELQWDKNSGEHFFFYTDNKDIRHAVFYPSSKSI 164

Query: 404 SLRLEEAHSWGCGISIWEIGQGLDYFFDLL 433
           SLR EEA S GCGISIWEIGQGLDYFF LL
Sbjct: 165 SLRSEEARSRGCGISIWEIGQGLDYFFYLL 194