Miyakogusa Predicted Gene

Lj1g3v3906720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3906720.1 tr|G7K3M7|G7K3M7_MEDTR Ferredoxin OS=Medicago
truncatula GN=MTR_5g006320 PE=4 SV=1,63.54,8e-17,
,NODE_49741_length_734_cov_251.583099.path2.1
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g44850.1                                                        72   1e-13
Glyma11g00800.1                                                        57   6e-09

>Glyma01g44850.1 
          Length = 147

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 9/85 (10%)

Query: 1  MATLQFTS--FSLFRPKKHPTTTTLSSTFQLNTLPRLASHKSPSLTVRSYKVVIEHEGQT 58
          MA+LQ T+  F+L R ++   T   S+  QLN  PR    +   ++VRSYKVVIEH+G++
Sbjct: 1  MASLQLTTTPFTLLRQQRQHPTKKKSTASQLNP-PR---PRPLRVSVRSYKVVIEHDGES 56

Query: 59 TQLEVEPDETILSKALDSCL---HD 80
          T++EVEPDETILSKALDS L   HD
Sbjct: 57 TEVEVEPDETILSKALDSGLSVPHD 81


>Glyma11g00800.1 
          Length = 103

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 31/32 (96%)

Query: 47 SYKVVIEHEGQTTQLEVEPDETILSKALDSCL 78
          SYKVVIEH+G++T++EVEPDETILSKALDS L
Sbjct: 1  SYKVVIEHDGESTEVEVEPDETILSKALDSGL 32