Miyakogusa Predicted Gene

Lj1g3v3905680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3905680.1 Non Chatacterized Hit- tr|B9RTS1|B9RTS1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,42.68,0.000000002,seg,NULL,
NODE_77065_length_713_cov_75.598877.path2.1
         (148 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g00780.1                                                       116   1e-26
Glyma01g44870.1                                                       100   4e-22
Glyma01g44890.1                                                        96   9e-21
Glyma11g00760.1                                                        86   1e-17

>Glyma11g00780.1 
          Length = 1310

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 94/150 (62%), Gaps = 20/150 (13%)

Query: 1   MEPGMRSGNSGAVVKNRNSSGCLIVRKKXXXXXXXXXXXXXXXXSSNSRKLYESMKRPNI 60
           ME G+RSG SG VVK+RNSSGCLIVRKK                +S SRKLYES  RPNI
Sbjct: 1   MESGVRSGGSGVVVKSRNSSGCLIVRKK---------GDVLGATASTSRKLYESKNRPNI 51

Query: 61  NNVPFTDSESSDELSLPMPKRHVRRLGPETIRVGNSGMI----GRSEVISKRGRMEQQVR 116
            NVP +DS SSDE  +P      RRLGPETIRV N        G SE+  KR R+ Q++R
Sbjct: 52  -NVPLSDSGSSDESPVPPG----RRLGPETIRVFNGFAAASERGGSEISRKRYRV-QRIR 105

Query: 117 GNGEGMIAEDGLDWRERKRGRLDM-NVSDY 145
           GNGEG+ AE GL+  ERKR +L + +  DY
Sbjct: 106 GNGEGIAAEKGLEQWERKRSKLVVYDFDDY 135


>Glyma01g44870.1 
          Length = 1236

 Score =  100 bits (250), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/148 (51%), Positives = 87/148 (58%), Gaps = 30/148 (20%)

Query: 1   MEPGMRSGNSGAVVKNRNSSGCLIVRKKXXXXXXXXXXXXXXXXSSNSRKLYESMKRPNI 60
           ME G+RSG SG VVK+RNSSGCLIVRKK                +S SRKLYES KRPNI
Sbjct: 1   MESGLRSGGSGVVVKSRNSSGCLIVRKK---------GDGLGATASTSRKLYESKKRPNI 51

Query: 61  NNVPFTDSESSDELSLPMPKRHVRRLGPETIRVGNSGMIGRSEVISKRGRMEQQVRGNGE 120
            NV  +DS SS E SL  P    RRLGPETIRV N   +  SE            RGNGE
Sbjct: 52  -NVSLSDSGSS-EGSLIPPG---RRLGPETIRVCNG--LAASE------------RGNGE 92

Query: 121 GMIAEDGLDWRERKRGRLDMNVSDYGEH 148
           G+ AE GL+  ERKR +L   V D+ ++
Sbjct: 93  GIAAEKGLEQWERKRSKL--GVYDFDDY 118


>Glyma01g44890.1 
          Length = 975

 Score = 96.3 bits (238), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/148 (49%), Positives = 89/148 (60%), Gaps = 18/148 (12%)

Query: 4   GMRSGNSGAVVKNRNSSGCLIVRKKXXXXXXXXXXXXXXXXSSNSRKLYESMKRPNINNV 63
           G+RSG SG VVK+RNSSGCLIVRKK                +S SR LYES KRPNIN  
Sbjct: 1   GVRSGGSGVVVKSRNSSGCLIVRKK---------GDGLSATASTSRNLYESKKRPNINVS 51

Query: 64  PFTDSESSDELSLPMPKRHVRRLGPETIRVGN---SGMIGRSEVISKRGRMEQQVRGNGE 120
             + S+S     L MP    RRLGPETIRV N   +   G SE+  KR R+E ++ G+GE
Sbjct: 52  V-SSSDSGSSDELLMPPG--RRLGPETIRVCNGLAASERGGSEISRKRDRVE-RISGSGE 107

Query: 121 GMIAEDGLDWRERKRGRLDMNVSDYGEH 148
            + AE GL+  ERKR +LD  V D+ E+
Sbjct: 108 DIAAEKGLEQWERKRSKLD--VYDFNEY 133


>Glyma11g00760.1 
          Length = 1263

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 82/136 (60%), Gaps = 20/136 (14%)

Query: 17  RNSSGCLIVRKKXXXXXXXXXXXXXXXXSSNSRKLYESMKRPNINNVPFTDSESSDELSL 76
           RNSSGCLIVRKK                +S SRKLYES KRPNI NVP + S+S     L
Sbjct: 17  RNSSGCLIVRKK---------GDGLGATASTSRKLYESKKRPNI-NVPVSSSDSGSSDEL 66

Query: 77  PMPKRHVRRLGPETIRVGNSGMIGR----SEVISKRGRMEQQVRGNGEGMIAEDGLDWRE 132
            MP    RRLGPETIRV N G++      SE+  KR R+  ++ G+GEG+ AE GL+  E
Sbjct: 67  LMPPG--RRLGPETIRVCN-GLVASERVGSEISRKRDRV-GRISGSGEGIGAEKGLEQWE 122

Query: 133 RKRGRLDMNVSDYGEH 148
           RKR +LD  V D+ E+
Sbjct: 123 RKRSKLD--VYDFDEY 136