Miyakogusa Predicted Gene
- Lj1g3v3904150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3904150.1 Non Chatacterized Hit- tr|B9RGZ9|B9RGZ9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.3,0.00000000007,coiled-coil,NULL; seg,NULL;
KIP1,KIP1-like,CUFF.31437.1
(286 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g05440.1 110 2e-24
>Glyma16g05440.1
Length = 152
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
Query: 51 VHYKWKEDLIEMLEELGQSYRVLVISYNQLKSKAXXXXXXXXXXXXXXXXXXXXAICNKT 110
+H KW+ DL++MLEE GQSYRVL ++YNQLK K AICN+
Sbjct: 1 MHGKWRGDLVQMLEEFGQSYRVLAVAYNQLKFKTSHGDFHLESLSSSGRSETICAICNRR 60
Query: 111 ATGNLEDEILKQGC-------NRYPKSRKEHSNGKFNGIDMHFELLNKQDDEYHELSSAG 163
ATGNLED+ L++ C N +PK EHS+ KF+ ++ +LLN+Q DE HE SA
Sbjct: 61 ATGNLEDKKLEE-CWNHHLDWNHHPKYSVEHSDIKFDSSNLGIDLLNQQGDECHEFLSAD 119
Query: 164 SCSMKFKSKHERRDS 178
CSMKFKS+ E R S
Sbjct: 120 LCSMKFKSELEWRHS 134