Miyakogusa Predicted Gene

Lj1g3v3904150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3904150.1 Non Chatacterized Hit- tr|B9RGZ9|B9RGZ9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.3,0.00000000007,coiled-coil,NULL; seg,NULL;
KIP1,KIP1-like,CUFF.31437.1
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g05440.1                                                       110   2e-24

>Glyma16g05440.1 
          Length = 152

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 81/135 (60%), Gaps = 8/135 (5%)

Query: 51  VHYKWKEDLIEMLEELGQSYRVLVISYNQLKSKAXXXXXXXXXXXXXXXXXXXXAICNKT 110
           +H KW+ DL++MLEE GQSYRVL ++YNQLK K                     AICN+ 
Sbjct: 1   MHGKWRGDLVQMLEEFGQSYRVLAVAYNQLKFKTSHGDFHLESLSSSGRSETICAICNRR 60

Query: 111 ATGNLEDEILKQGC-------NRYPKSRKEHSNGKFNGIDMHFELLNKQDDEYHELSSAG 163
           ATGNLED+ L++ C       N +PK   EHS+ KF+  ++  +LLN+Q DE HE  SA 
Sbjct: 61  ATGNLEDKKLEE-CWNHHLDWNHHPKYSVEHSDIKFDSSNLGIDLLNQQGDECHEFLSAD 119

Query: 164 SCSMKFKSKHERRDS 178
            CSMKFKS+ E R S
Sbjct: 120 LCSMKFKSELEWRHS 134