Miyakogusa Predicted Gene
- Lj1g3v3892320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3892320.1 tr|A9SWX5|A9SWX5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_234309,40,0.000000000000007,FAMILY NOT NAMED,NULL;
seg,NULL; BAR/IMD domain-like,NULL,CUFF.31391.1
(497 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g26880.2 652 0.0
Glyma19g26880.1 649 0.0
Glyma16g05610.1 598 e-171
Glyma20g39450.2 142 1e-33
Glyma02g46370.1 81 2e-15
Glyma01g06960.1 80 6e-15
Glyma12g21080.1 78 2e-14
Glyma01g11150.1 55 2e-07
>Glyma19g26880.2
Length = 622
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/540 (67%), Positives = 398/540 (73%), Gaps = 54/540 (10%)
Query: 1 MKRQCDEKRDVYEYMIAQQXXXXXXXXXXXXXITLQQLQAAHDEYKEEATLCAFRLKSLK 60
MKRQCDEKR+VYEYMIAQQ TLQQLQAAH EY+EEATLCAFRLKSLK
Sbjct: 94 MKRQCDEKRNVYEYMIAQQKEKGKSKSGKGESFTLQQLQAAHAEYEEEATLCAFRLKSLK 153
Query: 61 QGQSRSLLTQAARHYAAQLNFFRKGLKSLEAVEPHVRMVAGHQHIDYQFSGLEDDDGEDC 120
QGQSRSLLTQAARH+AAQLNFFRKGLKSLEAVEPHVRM+A QHIDYQFSGLEDD GE
Sbjct: 154 QGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMIAVRQHIDYQFSGLEDDGGESD 213
Query: 121 SEDAGNDDEIVEGTELSFNYRSNKQGPYTASTSPNSAEVEESRLSYV------------- 167
+ D GND +I+EG ELSF+YR+NKQGPY STSPN+AEV LS +
Sbjct: 214 NNDDGNDFDIIEGGELSFDYRANKQGPYIVSTSPNTAEVGNFTLSKINARLICYPIPPIS 273
Query: 168 -------------------------RASTAET-----AEIDKNQGDFKFSTRDRRVSSYS 197
R+S +T +DKNQGDFK S R VSSYS
Sbjct: 274 PMSENNLTINFREESDGQINFTIKQRSSPDKTPLPSGTSLDKNQGDFKVSNR---VSSYS 330
Query: 198 APIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKETKTXXXXXXXXXXXXHNLWHS 257
API AEKKFDPAEKVR LL+SSAAK NAYVLPTPVNIKETKT HNLWHS
Sbjct: 331 APILAEKKFDPAEKVRQLLASSAAKSNAYVLPTPVNIKETKTSSAPHISASGSLHNLWHS 390
Query: 258 SPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSIQLPRPSAEGLSLPQFDIFNAS 317
SPLDEKKNEKD VD KLSEP IPRAHS+LKESNSD T QLPRPSA+GLS PQ D+F+A+
Sbjct: 391 SPLDEKKNEKD-VDSKLSEPTIPRAHSVLKESNSDTTYTQLPRPSADGLSPPQVDLFSAT 449
Query: 318 DSKKTLRQAFSGPLTNKPLSVKPVSGAFPRLPMPQPTSPKAXXXXXXXXXXXXRISELHE 377
D+KK RQAFSGPLTNKPLSVKPVSG FPRLP+PQP+SPKA RISELHE
Sbjct: 450 DTKKIKRQAFSGPLTNKPLSVKPVSGGFPRLPVPQPSSPKASPNASPPLVSSPRISELHE 509
Query: 378 LPRPPGDQSSKPMKSSRVGHSAPLVFRNPDHPAANKFPSVVSSGASPLPTPPIMVSRSFS 437
LPRPPG+QSSKP RVGHSAPLV +NP+ NKFPSVV S ASPLPTPP VSRSFS
Sbjct: 510 LPRPPGNQSSKP----RVGHSAPLVLKNPEAAMTNKFPSVVFSAASPLPTPP--VSRSFS 563
Query: 438 IPSSNQRAMALNVTNTKYLDTRQIPEKVEVAASPPLTPISQRASSISDLATHSSEIQGRS 497
IPSS QR +ALNV+NTKYLDT Q+ KV+ A SPPLTP+SQRAS+ISDLA+HSSEIQG S
Sbjct: 564 IPSSGQRVVALNVSNTKYLDTPQV-SKVDKAVSPPLTPMSQRASNISDLASHSSEIQGGS 622
>Glyma19g26880.1
Length = 625
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/537 (67%), Positives = 396/537 (73%), Gaps = 54/537 (10%)
Query: 1 MKRQCDEKRDVYEYMIAQQXXXXXXXXXXXXXITLQQLQAAHDEYKEEATLCAFRLKSLK 60
MKRQCDEKR+VYEYMIAQQ TLQQLQAAH EY+EEATLCAFRLKSLK
Sbjct: 94 MKRQCDEKRNVYEYMIAQQKEKGKSKSGKGESFTLQQLQAAHAEYEEEATLCAFRLKSLK 153
Query: 61 QGQSRSLLTQAARHYAAQLNFFRKGLKSLEAVEPHVRMVAGHQHIDYQFSGLEDDDGEDC 120
QGQSRSLLTQAARH+AAQLNFFRKGLKSLEAVEPHVRM+A QHIDYQFSGLEDD GE
Sbjct: 154 QGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMIAVRQHIDYQFSGLEDDGGESD 213
Query: 121 SEDAGNDDEIVEGTELSFNYRSNKQGPYTASTSPNSAEVEESRLSYV------------- 167
+ D GND +I+EG ELSF+YR+NKQGPY STSPN+AEV LS +
Sbjct: 214 NNDDGNDFDIIEGGELSFDYRANKQGPYIVSTSPNTAEVGNFTLSKINARLICYPIPPIS 273
Query: 168 -------------------------RASTAET-----AEIDKNQGDFKFSTRDRRVSSYS 197
R+S +T +DKNQGDFK S R VSSYS
Sbjct: 274 PMSENNLTINFREESDGQINFTIKQRSSPDKTPLPSGTSLDKNQGDFKVSNR---VSSYS 330
Query: 198 APIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKETKTXXXXXXXXXXXXHNLWHS 257
API AEKKFDPAEKVR LL+SSAAK NAYVLPTPVNIKETKT HNLWHS
Sbjct: 331 APILAEKKFDPAEKVRQLLASSAAKSNAYVLPTPVNIKETKTSSAPHISASGSLHNLWHS 390
Query: 258 SPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSIQLPRPSAEGLSLPQFDIFNAS 317
SPLDEKKNEKD VD KLSEP IPRAHS+LKESNSD T QLPRPSA+GLS PQ D+F+A+
Sbjct: 391 SPLDEKKNEKD-VDSKLSEPTIPRAHSVLKESNSDTTYTQLPRPSADGLSPPQVDLFSAT 449
Query: 318 DSKKTLRQAFSGPLTNKPLSVKPVSGAFPRLPMPQPTSPKAXXXXXXXXXXXXRISELHE 377
D+KK RQAFSGPLTNKPLSVKPVSG FPRLP+PQP+SPKA RISELHE
Sbjct: 450 DTKKIKRQAFSGPLTNKPLSVKPVSGGFPRLPVPQPSSPKASPNASPPLVSSPRISELHE 509
Query: 378 LPRPPGDQSSKPMKSSRVGHSAPLVFRNPDHPAANKFPSVVSSGASPLPTPPIMVSRSFS 437
LPRPPG+QSSKP RVGHSAPLV +NP+ NKFPSVV S ASPLPTPP VSRSFS
Sbjct: 510 LPRPPGNQSSKP----RVGHSAPLVLKNPEAAMTNKFPSVVFSAASPLPTPP--VSRSFS 563
Query: 438 IPSSNQRAMALNVTNTKYLDTRQIPEKVEVAASPPLTPISQRASSISDLATHSSEIQ 494
IPSS QR +ALNV+NTKYLDT Q+ KV+ A SPPLTP+SQRAS+ISDLA+HSSEIQ
Sbjct: 564 IPSSGQRVVALNVSNTKYLDTPQV-SKVDKAVSPPLTPMSQRASNISDLASHSSEIQ 619
>Glyma16g05610.1
Length = 545
Score = 598 bits (1543), Expect = e-171, Method: Compositional matrix adjust.
Identities = 326/480 (67%), Positives = 358/480 (74%), Gaps = 33/480 (6%)
Query: 1 MKRQCDEKRDVYEYMIAQQXXXXXXXXXXXXXITLQQLQAAHDEYKEEATLCAFRLKSLK 60
MKRQCDEKRDVYEYMIAQQ TLQQLQAAH EY++EA LCAFRLKSLK
Sbjct: 95 MKRQCDEKRDVYEYMIAQQKEKGKSKSAKGESFTLQQLQAAHAEYEDEAKLCAFRLKSLK 154
Query: 61 QGQSRSLLTQAARHYAAQLNFFRKGLKSLEAVEPHVRMVAGHQHIDYQFSGLEDDDGEDC 120
QGQSRSLLTQAARH+AAQLNFFRKGLKSLEAV+PHVRM+A QHIDYQFSGLEDD GE+
Sbjct: 155 QGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVDPHVRMIAERQHIDYQFSGLEDDGGEND 214
Query: 121 SEDAGNDDEIVEGTELSFNYRSNKQGPYTASTSPNSAEVEESRLSYVRASTAETAEIDKN 180
+ D GND +++EG ELSF+YR+NKQGPY STSPNSAE N
Sbjct: 215 NNDDGNDFDVIEGGELSFDYRANKQGPYIVSTSPNSAE---------------------N 253
Query: 181 QGDFKFSTRDRRV----SSYSAPIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKE 236
Q F + +++ SYSAPI AEKKFDPAEKVR LL+ SAAK NAYVLPTPVNIKE
Sbjct: 254 QAVHIFELQPQKLQRVGGSYSAPILAEKKFDPAEKVRQLLAFSAAKSNAYVLPTPVNIKE 313
Query: 237 TKTXXXXXXXXXXXXHNLWHSSPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSI 296
TKT HNLWHSSPLDEKKNEKD VD KLSEP IPRAHS+LKES+SD +
Sbjct: 314 TKTSSAPRTSASGSLHNLWHSSPLDEKKNEKD-VDSKLSEPTIPRAHSVLKESDSDTSYT 372
Query: 297 QLPRPSAEGLSLPQFDIFNASDSKKTLRQAFSGPLTNKPLSVKPVSGAFPRLPMPQPTSP 356
QLPRPSA+GL LPQ D +ASD+KK RQAFSGPLTNKPLSVKPVSG F RLP+PQP+SP
Sbjct: 373 QLPRPSADGLLLPQVDFLSASDTKKIKRQAFSGPLTNKPLSVKPVSGGFSRLPVPQPSSP 432
Query: 357 KAXXXXXXXXXXXXRISELHELPRPPGDQSSKPMKSSRVGHSAPLVFRNPDHPAANKFPS 416
KA RISELHELPRPPG+QSSKP RVGHSAPLV +NP+ NKFPS
Sbjct: 433 KASPNASPPLVSSPRISELHELPRPPGNQSSKP----RVGHSAPLVLKNPEAAMTNKFPS 488
Query: 417 VVSSGASPLPTPPIMVSRSFSIPSSNQRAMALNVTNTKYLDTRQIPEKVEVAASPPLTPI 476
VV ASPLPTPP VSRSFSIPSS QR +ALNV+NTKYLDT Q+ KV+ A SPPLTPI
Sbjct: 489 VVLRAASPLPTPP--VSRSFSIPSSGQRVVALNVSNTKYLDTPQV-SKVDKAVSPPLTPI 545
>Glyma20g39450.2
Length = 2005
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 79/112 (70%)
Query: 1 MKRQCDEKRDVYEYMIAQQXXXXXXXXXXXXXITLQQLQAAHDEYKEEATLCAFRLKSLK 60
MK+ CDEKR+VYE M+ + I+LQ LQ A DEY EEATL FRLKSLK
Sbjct: 132 MKQHCDEKREVYESMLTRYRERGRSRSGKAENISLQHLQIARDEYDEEATLFVFRLKSLK 191
Query: 61 QGQSRSLLTQAARHYAAQLNFFRKGLKSLEAVEPHVRMVAGHQHIDYQFSGL 112
QGQS SLLTQAARH+AAQL FF+K +KSLE VEPHV+ V HIDYQF G+
Sbjct: 192 QGQSWSLLTQAARHHAAQLCFFKKAVKSLETVEPHVKSVTEQHHIDYQFIGI 243
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 151/312 (48%), Gaps = 35/312 (11%)
Query: 192 RVSSYSAPIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKET-------KTXXXXX 244
R +S SAP+F + K D +EK+R + + + K N+YVLPTPV+ K + +
Sbjct: 1693 RSASQSAPLFVDNKRDSSEKLRQMRPTLSRKFNSYVLPTPVDAKSSISMRSSNQVPLKIK 1752
Query: 245 XXXXXXXHNLWHSSPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSIQLPRPSAE 304
NLWHSSPL++KK E DG LS P A S+LKESNS+ +LP P +
Sbjct: 1753 TNLNEPMKNLWHSSPLEQKKYENIFGDGGLSGP---NAQSVLKESNSNTAYSRLPPPLID 1809
Query: 305 GLSLPQFDIFNASDSKKTLRQAFSGPLTNKPLSVKPVSGAFPRL---PMPQPTSPKAXXX 361
G D A SKK R AFSGPL + KPVS +L P+ + + P+
Sbjct: 1810 GNLSSSHDYITAY-SKKIKRHAFSGPLVSNAWPTKPVSLESVQLFSGPLLRTSIPQPPSS 1868
Query: 362 XXXXXXXXX-------RISELHELPRPPGDQSSKPMKSSRVGHSAPLVFRNPDHPAANKF 414
+I+ELHELPRPP S VGHS PLV R P AAN
Sbjct: 1869 SPKVSPSASPPLSSSPKINELHELPRPPTISPSDSKLLGLVGHSGPLVSRGPQLSAANYL 1928
Query: 415 PSVVSSGASPLPTPPIMVSRSFSIPSSNQRAMALNVTNTKYLDTRQI--PEKVEVAA--- 469
V S+ ASPLP P ++RSFS + A++ D+R + P K ++
Sbjct: 1929 --VTSNAASPLPMPASAMARSFSTSYRGAKVAAIH-------DSRPLEDPNKSTISEDID 1979
Query: 470 SPPLTPISQRAS 481
SPPL I+ S
Sbjct: 1980 SPPLMQIALSTS 1991
>Glyma02g46370.1
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 91/207 (43%), Gaps = 45/207 (21%)
Query: 205 KFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKETKTX-------XXXXXXXXXXXHNLWHS 257
K + +EK+R + S + K ++YVL TPV+ K + + NLWHS
Sbjct: 95 KLNASEKLRQMRPSLSRKFSSYVLATPVDAKSSTSSGSNNPKPSNMQANLREPTKNLWHS 154
Query: 258 SPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSIQLPRPSAEGLSLPQFDIFNAS 317
SPL++KK++KD+ D + S I A S+LKESN
Sbjct: 155 SPLEQKKHDKDMGD-EFSGSIIRSAQSLLKESNC-------------------------- 187
Query: 318 DSKKTLRQAFSGPLTNKPLSVKPVSGAFPRLPMPQPTSPKAXXXXXXXXXXXXRISELHE 377
L+ AFSGPLT+ PV+ + +SPK +ISELHE
Sbjct: 188 ----LLQHAFSGPLTSNLGPTNPVNCSL-------SSSPKVSPSASLTLMTSPQISELHE 236
Query: 378 LPRPPGDQSSKPMKSSRVGHSAPLVFR 404
LPRPP S VGHS PLV R
Sbjct: 237 LPRPPTSFPSNSRLLGLVGHSGPLVSR 263
>Glyma01g06960.1
Length = 186
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 197 SAPIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKETKTX-------XXXXXXXXX 249
SA +F + K +EK+R + SS + K N+YVLPTPV+ K + +
Sbjct: 2 SALLFVDNKLVASEKLRQMHSSLSQKFNSYVLPTPVDAKSSTSSGSNNPKPSKMQGKLSE 61
Query: 250 XXHNLWHSSPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSIQLPRPSAEGLSLP 309
NLWHSS L++K++EK + + S A S+LKESNS+ TS +L P +
Sbjct: 62 PTKNLWHSSLLEQKEHEKH-IGHEFSASIFKSAQSVLKESNSNTTSTRLSPPLIK----- 115
Query: 310 QFDIFNASDSKKTLRQAFSGPLTNKPLSVKPVS--------GAFPRLPMPQP--TSPKAX 359
R AFSGPLT+ P + K VS G + QP +S K
Sbjct: 116 --------------RHAFSGPLTSNPGATKLVSIESVQLFCGPLLLTLILQPPTSSLKVS 161
Query: 360 XXXXXXXXXXXRISELHELPRPP 382
+ISEL+ELPRPP
Sbjct: 162 HSTSPILMISPKISELYELPRPP 184
>Glyma12g21080.1
Length = 201
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 91/233 (39%), Gaps = 102/233 (43%)
Query: 1 MKRQCDEKRDVYEYMIAQQXXXXXXXXXXXXXITLQQLQAAHDEYKEEATLCAFRLKSLK 60
MKRQCD+KRD+Y+YM+ + L QLQ AHDEY ++ TL
Sbjct: 4 MKRQCDKKRDLYDYMVTRYREGDRSKGGKGETFLLHQLQTAHDEYDKDTTL--------- 54
Query: 61 QGQSRSLLTQAARHYAAQLNFFRKGLKSLEAVEPHVRMVAGHQHIDYQFSGLEDDDGEDC 120
+QHIDY+FSGLE++DG+
Sbjct: 55 -----------------------------------------YQHIDYRFSGLEEEDGD-- 71
Query: 121 SEDAGNDDEIVEGTELSFNYRSNKQGPYTASTSPNSAEVEESRLSYVRASTAETAEIDKN 180
EG +YR N G Y E ++ LS VRA
Sbjct: 72 -----------EG-----DYRDN--GGYD--------ENDDGELSPVRA----------- 94
Query: 181 QGDFKFSTRDRRVSSYSAPIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVN 233
S SAP+FA+ K D +EK R + S + K ++YVLPTPV+
Sbjct: 95 -------------GSQSAPLFADNKPDTSEKRRQMHPSLSRKFSSYVLPTPVH 134
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 375 LHELPRPPGDQSSKPMKSSRVGHSAPLVFRNPDHPAANKFPSVVSSGASPLPTPPIMVSR 434
+HE PRP S VGHS+PLV R AN V SS ASPLP PP ++
Sbjct: 133 VHEFPRPLTSFPSNSRLLGLVGHSSPLVSRGQKVSTANNL--VASSAASPLPMPPQPMAL 190
Query: 435 SFSIPSSNQRA 445
SFSIPSS R
Sbjct: 191 SFSIPSSGTRV 201
>Glyma01g11150.1
Length = 297
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 65/231 (28%)
Query: 179 KNQGDFKFSTRDRRVSSYSAPIFAEKKFDPAEKVRLLLSSSAAKPNAYVLPTPVNIKETK 238
+N F F R SA +FA K +EK+R + S + K N+Y P+ + K ++
Sbjct: 34 RNLFSFNF-----RAGFQSASLFAHNKPIASEKLRQMDRSVSRKINSY--PSKMQGKLSE 86
Query: 239 TXXXXXXXXXXXXHNLWHSSPLDEKKNEKDLVDGKLSEPAIPRAHSILKESNSDNTSIQL 298
NLWHSSPL++K++EK + G +I R+H +
Sbjct: 87 PTK-----------NLWHSSPLEQKEHEKCI--GDEFSASIVRSHDYI------------ 121
Query: 299 PRPSAEGLSLPQFDIFNASDSKKTLRQAFSGPLTNKPL-----------SVKPVSGAFPR 347
++ SKK R AF GPLT+ L SV+ G
Sbjct: 122 -----------------SAYSKKIKRHAFFGPLTSNQLFYGPTKLVSVESVQLFYGPLLL 164
Query: 348 LPMPQP--TSPKAXXXXXXXXXXXXRISELHELPRPPGDQSSKPMKSSRVG 396
P+ +P +SPK +ISEL+E+PRPP SS P S +G
Sbjct: 165 TPILKPPTSSPKVSPSASPTLVISPKISELYEIPRPP---SSFPSNSRLLG 212