Miyakogusa Predicted Gene
- Lj1g3v3891930.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3891930.3 tr|G7KPD6|G7KPD6_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_6g087700,70.21,0.0000005,PRONE,Plant specific Rop nucleotide
exchanger, PRONE,CUFF.31366.3
(58 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g32450.1 58 2e-09
Glyma07g09330.1 57 4e-09
Glyma15g01930.1 53 7e-08
Glyma08g21910.1 53 9e-08
Glyma07g02250.1 53 9e-08
Glyma07g16790.2 52 1e-07
Glyma07g16790.1 52 1e-07
Glyma18g41330.1 52 2e-07
Glyma13g43380.1 52 2e-07
Glyma14g06930.1 50 5e-07
Glyma02g41980.1 50 5e-07
Glyma03g16610.2 50 6e-07
Glyma03g16610.1 50 6e-07
Glyma01g26010.1 50 8e-07
Glyma12g02620.1 49 9e-07
Glyma11g10330.1 49 9e-07
Glyma18g03610.1 49 1e-06
Glyma11g34690.1 49 1e-06
>Glyma09g32450.1
Length = 492
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFGIPSFEQS 47
M RFAKLLLGED+SGAGN SS LALS AITNLA FG EQS
Sbjct: 86 MKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFG----EQS 128
>Glyma07g09330.1
Length = 523
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
Query: 4 RFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFGIPSFEQS 47
RFAKLLLGED+SGAGN SS LALS AITNLA FG EQS
Sbjct: 93 RFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFG----EQS 132
>Glyma15g01930.1
Length = 481
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG G SS LALS A TNLA FG
Sbjct: 41 MKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFG 80
>Glyma08g21910.1
Length = 439
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG G SS LALS A TNLA FG
Sbjct: 8 MKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFG 47
>Glyma07g02250.1
Length = 512
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG G SS LALS A TNLA FG
Sbjct: 93 MKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFG 132
>Glyma07g16790.2
Length = 423
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG GN ++ LA+S AITNL FG
Sbjct: 90 MKERFAKLLLGEDMSGCGNGVTTALAISNAITNLCATLFG 129
>Glyma07g16790.1
Length = 628
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG GN ++ LA+S AITNL FG
Sbjct: 144 MKERFAKLLLGEDMSGCGNGVTTALAISNAITNLCATLFG 183
>Glyma18g41330.1
Length = 590
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG GN ++ LA+S AITNL FG
Sbjct: 117 MKERFAKLLLGEDMSGCGNGVATALAISNAITNLCATLFG 156
>Glyma13g43380.1
Length = 524
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RF+KLLLGED+SG G SS LALS A TNLA FG
Sbjct: 83 MKERFSKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFG 122
>Glyma14g06930.1
Length = 619
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+G S LA+S AITNL FG
Sbjct: 103 MKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFG 142
>Glyma02g41980.1
Length = 557
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+G S LA+S AITNL FG
Sbjct: 78 MKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFG 117
>Glyma03g16610.2
Length = 488
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+GN + L +S AITNL FG
Sbjct: 1 MKERFAKLLLGEDMSGSGNGVPAALTISNAITNLCATLFG 40
>Glyma03g16610.1
Length = 668
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+GN + L +S AITNL FG
Sbjct: 181 MKERFAKLLLGEDMSGSGNGVPAALTISNAITNLCATLFG 220
>Glyma01g26010.1
Length = 438
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+GN + L +S AITNL FG
Sbjct: 7 MKERFAKLLLGEDMSGSGNGVPAALTVSNAITNLCATLFG 46
>Glyma12g02620.1
Length = 568
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG G + LA+S AITNL+ FG
Sbjct: 96 MKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFG 135
>Glyma11g10330.1
Length = 566
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG G + LA+S AITNL+ FG
Sbjct: 94 MKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFG 133
>Glyma18g03610.1
Length = 483
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+G + LA+S AITNL FG
Sbjct: 6 MKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFG 45
>Glyma11g34690.1
Length = 498
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
M RFAKLLLGED+SG+G + LA+S AITNL FG
Sbjct: 2 MKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFG 41