Miyakogusa Predicted Gene

Lj1g3v3858530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3858530.1 tr|B9GF53|B9GF53_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_752753 PE=4
SV=1,43.01,0.000000001, ,AV409313.path2.1
         (102 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g05800.1                                                       131   1e-31
Glyma19g26600.1                                                       102   1e-22

>Glyma16g05800.1 
          Length = 1313

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/101 (64%), Positives = 76/101 (75%), Gaps = 14/101 (13%)

Query: 1   MSNQSYHSEIKFSDEQRFNNIVAQDEDATFSNLAGSSNDNPFVRPVGANSSYSHPTGRPI 60
           + NQ YHSE+KFSD+Q F+NIVA DED T               P+  N+SYSHPTG+P+
Sbjct: 501 IPNQGYHSEVKFSDDQCFSNIVAHDEDITL--------------PMDFNASYSHPTGKPV 546

Query: 61  ANEITGSDTQNSEADKLHPFGLLMSELRDGSHLRRAQSSNN 101
           ANE+  +DT N+EADKLHPFGLLMSELRDGSHLRRAQSSNN
Sbjct: 547 ANEVPVNDTHNNEADKLHPFGLLMSELRDGSHLRRAQSSNN 587


>Glyma19g26600.1 
          Length = 1296

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 10/102 (9%)

Query: 1   MSNQSYHSEIKFSDEQRFNNIVAQDEDATFSNLAGSSNDNPFVRPVGANSSYSHPTGRPI 60
           + NQSYHSE+KFSD+Q    +      A   ++     DN F     A  SY H TG+P+
Sbjct: 573 LPNQSYHSEVKFSDDQVSYLLSCS---AILMSI-----DNYFAYQFIA--SYPHSTGKPV 622

Query: 61  ANEITGSDTQNSEADKLHPFGLLMSELRDGSHLRRAQSSNNS 102
           ANE+  +DT N+EADKLHPFGLLMSELRDGSHLRRAQSSN+S
Sbjct: 623 ANEVAVNDTHNNEADKLHPFGLLMSELRDGSHLRRAQSSNSS 664