Miyakogusa Predicted Gene

Lj1g3v3834310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3834310.1 tr|I3SFH0|I3SFH0_MEDTR DNA replication complex
GINS protein PSF2 OS=Medicago truncatula PE=2 SV=1,81.99,0,DNA
REPLICATION COMPLEX GINS PROTEIN PSF2,GINS complex, subunit Psf2;
Sld5,GINS complex,CUFF.31241.1
         (211 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g06270.4                                                       343   6e-95
Glyma16g06270.3                                                       343   6e-95
Glyma16g06270.1                                                       339   1e-93
Glyma16g06270.2                                                       241   3e-64

>Glyma16g06270.4 
          Length = 210

 Score =  343 bits (881), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 168/211 (79%), Positives = 182/211 (86%), Gaps = 1/211 (0%)

Query: 1   MAGQSDNXXXXXXXXXXXXIAEDETVEIVPKFKMDPLCFISGDFGPFSPNVPTQVPIWLA 60
           MAGQS++            IAEDE V+IVP  KM  L FISGDFGPF+P + TQVP+WLA
Sbjct: 1   MAGQSNHDLSLFSAEELEFIAEDEIVDIVPNLKMSALNFISGDFGPFTPQIVTQVPLWLA 60

Query: 61  IALKKRSKCVIRPPQWMTVEKLTQILEAERDSQEMSEQLPFHYIEISRLLFNHARDNIAD 120
            ALKKR KC I PPQWM+VEKL+Q+LEAERDSQEMS+QLPFHY+EISRLLF+HARDNI D
Sbjct: 61  TALKKRGKCSICPPQWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHARDNIPD 120

Query: 121 DYMVRSLIEDIRNVRFHKIETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKH 180
            YMVRSLIEDIRNVRFHK+ETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKH
Sbjct: 121 VYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKH 180

Query: 181 DSPDLIPDPERVSDRRPQAANNNAPRRQLRR 211
           DSP+LIPDPERVSDRRPQ   NNAPRRQLRR
Sbjct: 181 DSPELIPDPERVSDRRPQVI-NNAPRRQLRR 210


>Glyma16g06270.3 
          Length = 210

 Score =  343 bits (881), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 168/211 (79%), Positives = 182/211 (86%), Gaps = 1/211 (0%)

Query: 1   MAGQSDNXXXXXXXXXXXXIAEDETVEIVPKFKMDPLCFISGDFGPFSPNVPTQVPIWLA 60
           MAGQS++            IAEDE V+IVP  KM  L FISGDFGPF+P + TQVP+WLA
Sbjct: 1   MAGQSNHDLSLFSAEELEFIAEDEIVDIVPNLKMSALNFISGDFGPFTPQIVTQVPLWLA 60

Query: 61  IALKKRSKCVIRPPQWMTVEKLTQILEAERDSQEMSEQLPFHYIEISRLLFNHARDNIAD 120
            ALKKR KC I PPQWM+VEKL+Q+LEAERDSQEMS+QLPFHY+EISRLLF+HARDNI D
Sbjct: 61  TALKKRGKCSICPPQWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHARDNIPD 120

Query: 121 DYMVRSLIEDIRNVRFHKIETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKH 180
            YMVRSLIEDIRNVRFHK+ETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKH
Sbjct: 121 VYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKH 180

Query: 181 DSPDLIPDPERVSDRRPQAANNNAPRRQLRR 211
           DSP+LIPDPERVSDRRPQ   NNAPRRQLRR
Sbjct: 181 DSPELIPDPERVSDRRPQVI-NNAPRRQLRR 210


>Glyma16g06270.1 
          Length = 211

 Score =  339 bits (869), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 168/212 (79%), Positives = 182/212 (85%), Gaps = 2/212 (0%)

Query: 1   MAGQSDNXXXXXXXXXXXXIAEDETVEIVPKFKMDPLCFISGDFGPFSPNVPTQVPIWLA 60
           MAGQS++            IAEDE V+IVP  KM  L FISGDFGPF+P + TQVP+WLA
Sbjct: 1   MAGQSNHDLSLFSAEELEFIAEDEIVDIVPNLKMSALNFISGDFGPFTPQIVTQVPLWLA 60

Query: 61  IALKKRSKCVIRPPQWMTVEKLTQILEAERDSQEMSEQLPFHYIEISRLLFNHARDNIAD 120
            ALKKR KC I PPQWM+VEKL+Q+LEAERDSQEMS+QLPFHY+EISRLLF+HARDNI D
Sbjct: 61  TALKKRGKCSICPPQWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHARDNIPD 120

Query: 121 DYMVRSLIEDIRNVRFHKIETDLEAFNGRTIAVK-IKNLSAMEVNIVRPFIGRALQAFYK 179
            YMVRSLIEDIRNVRFHK+ETDLEAFNGRTIAVK IKNLSAMEVNIVRPFIGRALQAFYK
Sbjct: 121 VYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVKVIKNLSAMEVNIVRPFIGRALQAFYK 180

Query: 180 HDSPDLIPDPERVSDRRPQAANNNAPRRQLRR 211
           HDSP+LIPDPERVSDRRPQ   NNAPRRQLRR
Sbjct: 181 HDSPELIPDPERVSDRRPQVI-NNAPRRQLRR 211


>Glyma16g06270.2 
          Length = 159

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 115/154 (74%), Positives = 128/154 (83%)

Query: 1   MAGQSDNXXXXXXXXXXXXIAEDETVEIVPKFKMDPLCFISGDFGPFSPNVPTQVPIWLA 60
           MAGQS++            IAEDE V+IVP  KM  L FISGDFGPF+P + TQVP+WLA
Sbjct: 1   MAGQSNHDLSLFSAEELEFIAEDEIVDIVPNLKMSALNFISGDFGPFTPQIVTQVPLWLA 60

Query: 61  IALKKRSKCVIRPPQWMTVEKLTQILEAERDSQEMSEQLPFHYIEISRLLFNHARDNIAD 120
            ALKKR KC I PPQWM+VEKL+Q+LEAERDSQEMS+QLPFHY+EISRLLF+HARDNI D
Sbjct: 61  TALKKRGKCSICPPQWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHARDNIPD 120

Query: 121 DYMVRSLIEDIRNVRFHKIETDLEAFNGRTIAVK 154
            YMVRSLIEDIRNVRFHK+ETDLEAFNGRTIAVK
Sbjct: 121 VYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVK 154