Miyakogusa Predicted Gene

Lj1g3v3834280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3834280.1 Non Chatacterized Hit- tr|A5AQV3|A5AQV3_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,56.19,7e-18,
,CUFF.31246.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g25330.1                                                       135   1e-32
Glyma16g06310.1                                                       129   6e-31
Glyma05g14870.1                                                       110   3e-25
Glyma19g22270.1                                                       109   6e-25

>Glyma19g25330.1 
          Length = 245

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 18/116 (15%)

Query: 1   MGSCSSVHRNQETNMKHLGLSFCSKTDKLVIPPTPIKEKPK--NGNFL---------NSQ 49
           MG CSSVHRN++TNMKHL LSF SKT+ LVIPP+P K+K K  NGNF+           Q
Sbjct: 1   MGLCSSVHRNEQTNMKHLTLSFESKTESLVIPPSPFKDKDKAINGNFVVADDDAAFKAQQ 60

Query: 50  SPPSRSTTII-------NGSKEEVFFESKVWLDSDCDDDFYSVNGEFTPSRGSTPV 98
             PSRSTT         N  KEE FF+SK WLDSDCDDDFYSV GEFTPSRGSTPV
Sbjct: 61  WSPSRSTTTFSVTDCGDNDGKEESFFDSKAWLDSDCDDDFYSVKGEFTPSRGSTPV 116


>Glyma16g06310.1 
          Length = 249

 Score =  129 bits (325), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 81/117 (69%), Gaps = 19/117 (16%)

Query: 1   MGSCSSVHRNQETNMKH-LGLSFCSKTDKLVIPPTPI--KEKPKNGNFL---------NS 48
           MG CSSVHRN++TNMKH L LSF SKT+ L+IP +P   KEKPKNGNF+           
Sbjct: 1   MGLCSSVHRNEQTNMKHHLTLSFESKTESLLIPSSPFEDKEKPKNGNFVVVADDDAFKPQ 60

Query: 49  QSPPSRSTTII-------NGSKEEVFFESKVWLDSDCDDDFYSVNGEFTPSRGSTPV 98
           Q  PSRSTT         N  KEE FF+SK WLDSDCDDDFYSV GEFTPSRGSTPV
Sbjct: 61  QWSPSRSTTTFSVKDCGDNDGKEESFFDSKAWLDSDCDDDFYSVKGEFTPSRGSTPV 117


>Glyma05g14870.1 
          Length = 214

 Score =  110 bits (276), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 74/99 (74%), Gaps = 10/99 (10%)

Query: 1  MGSCSSVHRNQETNMKHLGLSFCSKTDKLVIPPTPIK-EKPKNGNFLNSQSPPSRSTTII 59
          MG CSSV RN   +MK L LSF SK++KLVI P+PIK ++P+NG         S +T   
Sbjct: 1  MGLCSSVPRNANADMK-LKLSFGSKSEKLVIHPSPIKGQQPQNGW--------STTTFTD 51

Query: 60 NGSKEEVFFESKVWLDSDCDDDFYSVNGEFTPSRGSTPV 98
          +GSKEE FF+SK WLDSDC+DDFYSVNG+FTPSRG+TP+
Sbjct: 52 HGSKEEAFFDSKAWLDSDCEDDFYSVNGDFTPSRGTTPI 90


>Glyma19g22270.1 
          Length = 224

 Score =  109 bits (273), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)

Query: 1  MGSCSSVHRNQETNMKHLGLSFCSKTDKLVIPPTPIKEKPKNGNFLNSQSPPSRSTTIIN 60
          MG CSSV RN   +MK L LSF SK++KLVIPPT IK + +        +  S +T   +
Sbjct: 1  MGLCSSVPRNANEDMK-LKLSFGSKSEKLVIPPTSIKGQQQQQPQNGWSTARSTTTFTDH 59

Query: 61 GSKEEVFFESKVWLDSDCDDDFYSVNGEFTPSRGSTPV 98
          GSKEE FF+SK WLDSDC+DDFYSVNG+FTPSRG+TPV
Sbjct: 60 GSKEEAFFDSKAWLDSDCEDDFYSVNGDFTPSRGTTPV 97