Miyakogusa Predicted Gene

Lj1g3v3789400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3789400.1 Non Chatacterized Hit- tr|K3ZNZ7|K3ZNZ7_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,54.65,2e-19,seg,NULL,CUFF.31181.1
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g03370.1                                                       190   2e-49
Glyma14g23830.1                                                       159   5e-40
Glyma06g11880.1                                                       136   5e-33
Glyma04g42880.1                                                        92   1e-19
Glyma08g00570.1                                                        79   8e-16
Glyma05g32940.1                                                        72   9e-14

>Glyma13g03370.1 
          Length = 158

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/123 (74%), Positives = 100/123 (81%), Gaps = 3/123 (2%)

Query: 1   MDNSDINRDGHYNRTYSSFSCSSQRDVRYSCGNCGYELXXXXXXXXXXXXXXKYGKSIRR 60
           MD+S   RDGH+NRTYS   CSSQRDVRYSCG CGYEL              KYGKSI+R
Sbjct: 1   MDDSAFKRDGHFNRTYS---CSSQRDVRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKR 57

Query: 61  GIISFFNIDDSRFTRVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHNGYTSSFP 120
           GIISFF+ID SRFT+VDE+QCVPHF KHSWGLFRRRTKLLCRKCGNHIGNA+NGYTSSFP
Sbjct: 58  GIISFFSIDLSRFTQVDEIQCVPHFDKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFP 117

Query: 121 LVS 123
           LV+
Sbjct: 118 LVT 120


>Glyma14g23830.1 
          Length = 178

 Score =  159 bits (403), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 76/99 (76%), Positives = 81/99 (81%)

Query: 25  RDVRYSCGNCGYELXXXXXXXXXXXXXXKYGKSIRRGIISFFNIDDSRFTRVDELQCVPH 84
           RDV YSCG CGYEL              KYGKSI+RGIISFF+ID SRFT+VDE+QCVPH
Sbjct: 42  RDVCYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPH 101

Query: 85  FSKHSWGLFRRRTKLLCRKCGNHIGNAHNGYTSSFPLVS 123
           F KHSWGLFRRRTKLLCRKCGNHIGNA+NGYTSSFPLVS
Sbjct: 102 FDKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVS 140


>Glyma06g11880.1 
          Length = 168

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/128 (61%), Positives = 87/128 (67%), Gaps = 5/128 (3%)

Query: 1   MDNSDINRDG--HYNRT--YSSFSCSSQRDVRYSCGNCGYELXXXXXXXXXXXXXXKYGK 56
           M NS  N     H NRT    S+S SSQRDV YSCG CGYEL              KYGK
Sbjct: 1   MKNSVFNNKAQVHQNRTCSSYSYSYSSQRDVCYSCGTCGYELNLSSSNRNISSIGSKYGK 60

Query: 57  SIRRGIISFFNIDDSRFTRVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHNGYT 116
           SI+RGIISF N+DDSRFTR DE++  P+FSKH WGLFRR+TKLLCRKC NHIG A+N  T
Sbjct: 61  SIKRGIISFLNVDDSRFTRADEIEFAPYFSKHKWGLFRRKTKLLCRKCCNHIGYAYNDRT 120

Query: 117 SS-FPLVS 123
           SS FP VS
Sbjct: 121 SSFFPFVS 128


>Glyma04g42880.1 
          Length = 112

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 5/66 (7%)

Query: 55  GKSIRRGIISFFNIDDSRFTRVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHNG 114
             S++RGIISF N+DDSRFTRVDE++  P+FSK+SWG FRR+TKLLCRKC NHI   H  
Sbjct: 35  AMSLKRGIISFLNVDDSRFTRVDEIEFAPYFSKYSWGFFRRKTKLLCRKCCNHIALHH-- 92

Query: 115 YTSSFP 120
              SFP
Sbjct: 93  ---SFP 95


>Glyma08g00570.1 
          Length = 161

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 12/93 (12%)

Query: 25  RDVRYSCGNCGYELXXXXXXXXXXXXXXKYGKSIRRGIISFFNIDDSRFTRVDELQCVPH 84
           RDV YSCG+CGYEL                 KSI+RGIISFF++D+SRFT++ +L    H
Sbjct: 24  RDVNYSCGSCGYELNLNSSNRNTCSLID--SKSIKRGIISFFSVDESRFTQIQQL----H 77

Query: 85  FSKHSWGLF----RRRTKLLCRKCGNHIGNAHN 113
           +   SW  F    R+RTKL CR CGNH+G A+ 
Sbjct: 78  WP--SWMPFFNSKRQRTKLFCRSCGNHLGYAYT 108


>Glyma05g32940.1 
          Length = 128

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 10/102 (9%)

Query: 25  RDVRYSCGNCGYELXXXXXXXXXXXXXXKYGKSIRRGIISFFNIDDSRFTRVDELQ---C 81
           R +  SC +CGYEL                 KSI+RGIISFF++D+SRFT++ +L     
Sbjct: 6   RIMNSSCSSCGYELNLNSSNRNTCSLID--SKSIKRGIISFFSVDESRFTQIQQLHWPSW 63

Query: 82  VPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHNGYTSSFPLVS 123
           +P F+       R+RTKLLCR CGNH+G A+   + S+  +S
Sbjct: 64  IPFFNSK-----RQRTKLLCRSCGNHLGYAYTSPSQSWDGIS 100