Miyakogusa Predicted Gene

Lj1g3v3754960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3754960.1 tr|B9NHA2|B9NHA2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584780 PE=4
SV=1,37.5,0.000000000000005,UBX-RELATED,NULL; UBX,UBX; seg,NULL;
Ubiquitin-like,NULL; no description,NULL,CUFF.31152.1
         (262 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g24300.1                                                       292   2e-79
Glyma16g06840.1                                                       287   1e-77

>Glyma19g24300.1 
          Length = 257

 Score =  292 bits (748), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 179/264 (67%), Gaps = 9/264 (3%)

Query: 1   MVVGGSFPLASKRRRLTNTYSSAMDSEAAKAKLAAMTERYGREFHVFETSTFXXXXXXXX 60
           MVV GSFPL SKRRR+T+  S+ MD+E AKAKLAA+ ER+GRE HVFETS          
Sbjct: 1   MVVSGSFPLTSKRRRVTSFCSTDMDAETAKAKLAAVKERFGREIHVFETSVVSLSSKAAL 60

Query: 61  XXXXQLNVEEEETDDL-EFSPEDYIRISSIKKPEPILKTRKMXXXXXXXXKSKMTRAVIR 119
                     EETDD  EF+ EDY R+ + KK +  LKTRK+        +S++T+AVIR
Sbjct: 61  SNG-------EETDDFYEFTAEDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKAVIR 113

Query: 120 VRFPDNHTLEATFDPSETIQTLIDLLIKVIAQPEQPFYIYTVPPKKLITNMSQDFYAAGF 179
           VRFPDNHTLE TF PSETIQ+LIDLL KVIAQPEQPFYIYT PPKK+I +MS+DFY AGF
Sbjct: 114 VRFPDNHTLEVTFHPSETIQSLIDLLTKVIAQPEQPFYIYTTPPKKVINDMSRDFYTAGF 173

Query: 180 CPGALVNFSYDVSKGGSAV-DLNSPYLREEILSLKGSDAANDQGQQSELVQSXXXXXXXX 238
           CPGA+V FSY+V KG S V D  SPYL+EEILSLK    A DQGQQSE V          
Sbjct: 174 CPGAIVYFSYNVPKGDSTVGDHTSPYLQEEILSLKDLHDAIDQGQQSEPVVQSEPEPAVA 233

Query: 239 XXXXXXXXXXXAQKKLVKPKWLKM 262
                      A+KK+VKPKWLKM
Sbjct: 234 THPHPVEERKPAEKKVVKPKWLKM 257


>Glyma16g06840.1 
          Length = 258

 Score =  287 bits (734), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 178/264 (67%), Gaps = 8/264 (3%)

Query: 1   MVVGGSFPLASKRRRLTNTYSSAMDSEAAKAKLAAMTERYGREFHVFETSTFXXXXXXXX 60
           MVV GS PL SKRRR+TN  S+ MD+E AKAKLAA+ ER+GRE HVFETS          
Sbjct: 1   MVVSGSSPLTSKRRRVTNFCSTDMDAETAKAKLAAVKERFGREIHVFETSVLSSSSKAAL 60

Query: 61  XXXXQLNVEEEETDDL-EFSPEDYIRISSIKKPEPILKTRKMXXXXXXXXKSKMTRAVIR 119
                   E EETDD  EF+ EDY R+ + KK +  LKTRK+        +S++T+AVIR
Sbjct: 61  SN------EGEETDDFYEFTAEDYYRLLATKKEDKFLKTRKLREAEEAARRSRITKAVIR 114

Query: 120 VRFPDNHTLEATFDPSETIQTLIDLLIKVIAQPEQPFYIYTVPPKKLITNMSQDFYAAGF 179
           +RFPDNHTLEATF PSETIQ+LIDLL KVIAQPEQPFYIYT PPKK+I +MS DFY AGF
Sbjct: 115 IRFPDNHTLEATFHPSETIQSLIDLLTKVIAQPEQPFYIYTTPPKKVINDMSLDFYTAGF 174

Query: 180 CPGALVNFSYDVSKGGSAV-DLNSPYLREEILSLKGSDAANDQGQQSELVQSXXXXXXXX 238
           CPGA+V FSY+V KG S V D  SPYL+E+ILSLK    A DQGQQSE V          
Sbjct: 175 CPGAIVYFSYNVPKGDSTVGDHTSPYLQEDILSLKDLHIAIDQGQQSEPVVQPDPEPTVA 234

Query: 239 XXXXXXXXXXXAQKKLVKPKWLKM 262
                       +KK+VKPKWLKM
Sbjct: 235 AHPPPVEERKPTEKKVVKPKWLKM 258