Miyakogusa Predicted Gene
- Lj1g3v3729250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3729250.1 Non Chatacterized Hit- tr|I3T9F5|I3T9F5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,44.83,3e-19,UBIQUITIN_2,Ubiquitin supergroup; Ubiquitin-like,NULL;
seg,NULL; UBQ6 (UBIQUITIN 6), PROTEIN BINDING,CUFF.31126.1
(142 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g23510.1 201 3e-52
Glyma16g07200.1 199 9e-52
Glyma19g07600.1 186 9e-48
Glyma02g39440.1 115 1e-26
Glyma15g09850.1 95 2e-20
Glyma16g32290.2 92 1e-19
Glyma16g32290.1 92 2e-19
Glyma13g29240.1 92 2e-19
Glyma16g32280.2 91 5e-19
Glyma16g32280.1 91 5e-19
Glyma09g27100.1 90 8e-19
Glyma09g27070.1 88 3e-18
Glyma07g18660.2 87 5e-18
Glyma07g18660.1 87 5e-18
Glyma05g03520.2 79 1e-15
Glyma05g03520.1 79 1e-15
Glyma17g14080.1 76 1e-14
Glyma01g30910.1 66 1e-11
Glyma03g06660.1 64 7e-11
Glyma18g43530.1 61 4e-10
Glyma17g32640.1 50 7e-07
Glyma08g23090.1 49 2e-06
>Glyma19g23510.1
Length = 156
Score = 201 bits (510), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/120 (81%), Positives = 110/120 (91%), Gaps = 1/120 (0%)
Query: 20 NGNKATPQTEKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISI 79
NG+KATP EKDCRS E +WE+RPGGMLVQKR+ SNQ +G+GMITIIVST+S+S +ISI
Sbjct: 18 NGHKATPPIEKDCRSIGEIQWELRPGGMLVQKRK-SNQSAGEGMITIIVSTMSQSQEISI 76
Query: 80 EATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKE 139
EATSTFGELKMILSLVTS EPREQRLLFKGKERD+DEYLHMVGVR KDKVLLL+DPA+KE
Sbjct: 77 EATSTFGELKMILSLVTSFEPREQRLLFKGKERDDDEYLHMVGVREKDKVLLLEDPAIKE 136
>Glyma16g07200.1
Length = 157
Score = 199 bits (506), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 109/120 (90%), Gaps = 1/120 (0%)
Query: 20 NGNKATPQTEKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISI 79
G+KAT TEKDCRS E +WE+RPGGMLVQKRE SNQ +G+GMITIIVSTVS+SH+ISI
Sbjct: 19 GGHKATTPTEKDCRSIGEIQWELRPGGMLVQKRE-SNQSAGEGMITIIVSTVSQSHEISI 77
Query: 80 EATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKE 139
EATSTFGELKMILSL TS EPREQRLLFKGKER++DEYLHMVGVR+KDKVLL +DPA+KE
Sbjct: 78 EATSTFGELKMILSLATSFEPREQRLLFKGKEREDDEYLHMVGVRDKDKVLLFEDPAIKE 137
>Glyma19g07600.1
Length = 159
Score = 186 bits (471), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 113/124 (91%), Gaps = 2/124 (1%)
Query: 20 NGNKATPQT-EKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDIS 78
NG+KA + EKDC+S E KWE+RPGGMLVQKRE SNQ SG+G+ITI VSTVS+ HDI+
Sbjct: 19 NGSKAASSSPEKDCKSIGEIKWELRPGGMLVQKRE-SNQSSGEGVITIRVSTVSQWHDIN 77
Query: 79 IEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALK 138
I+ATSTFGELKMILSLVTSLEPREQRLLF+GKE++++E+LHMVGVR+KDKVLLL+DPA+K
Sbjct: 78 IDATSTFGELKMILSLVTSLEPREQRLLFRGKEKEDNEFLHMVGVRDKDKVLLLEDPAIK 137
Query: 139 ELRV 142
E+++
Sbjct: 138 EMKL 141
>Glyma02g39440.1
Length = 268
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Query: 40 WEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVTSLE 99
WE+RPGGMLVQKR+ + S MI I VS S H++++ A STFG LKM+L+ T LE
Sbjct: 25 WELRPGGMLVQKRQPLDSSSSS-MIKIKVSHGSYHHEVTVPAQSTFGHLKMVLTSETGLE 83
Query: 100 PREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
P+EQRLLF+GKE++++E LHMVGV++ KV+LL+DPA KE ++
Sbjct: 84 PKEQRLLFRGKEKEDEECLHMVGVKDMSKVILLEDPASKERKL 126
>Glyma15g09850.1
Length = 251
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 37 ETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVT 96
E++WE+RPGGMLVQKR + + + + ++ + ++I + + +TFGE+K +LS T
Sbjct: 23 ESEWEMRPGGMLVQKRTTNTDVVTRNL-RLRIAYGALRYEICVSSIATFGEVKKVLSGET 81
Query: 97 SLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELR 141
LE EQRLL++GKER+N EYL + GV+++ KV+L++DP+ E R
Sbjct: 82 GLEVDEQRLLYRGKERENGEYLDVCGVKDRSKVVLIQDPSSIERR 126
>Glyma16g32290.2
Length = 325
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 32 CRSNSETK-WEIRPGGMLVQKREISNQISGDGMITIIVSTVSES--HDISIEATSTFGEL 88
CRS +K WE+RPGGMLVQ R + + + TI V S H+++I + +TFGEL
Sbjct: 31 CRSEPGSKEWEMRPGGMLVQMRTADSDRNPALVPTIRVRVKYGSIYHEVNISSQATFGEL 90
Query: 89 KMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
K +LS T L +Q+LL+K KERD+ +L MVGV++K K++L++DP +E R+
Sbjct: 91 KKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLMEDPISQEKRL 144
>Glyma16g32290.1
Length = 354
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 32 CRSNSETK-WEIRPGGMLVQKREISNQISGDGMITIIVSTVSES--HDISIEATSTFGEL 88
CRS +K WE+RPGGMLVQ R + + + TI V S H+++I + +TFGEL
Sbjct: 31 CRSEPGSKEWEMRPGGMLVQMRTADSDRNPALVPTIRVRVKYGSIYHEVNISSQATFGEL 90
Query: 89 KMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
K +LS T L +Q+LL+K KERD+ +L MVGV++K K++L++DP +E R+
Sbjct: 91 KKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLMEDPISQEKRL 144
>Glyma13g29240.1
Length = 253
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 73/105 (69%)
Query: 37 ETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVT 96
E++WE+RPGGMLVQKR + + + + ++ + ++I + + +TFGE+K +L T
Sbjct: 24 ESEWEMRPGGMLVQKRTANTDAAVTRNLRLRIAYGALRYEICVSSIATFGEVKKVLCGET 83
Query: 97 SLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELR 141
LE EQ+L+++G+ER+N EYL + GV+++ KV+L++DP+ E R
Sbjct: 84 GLEVDEQKLVYRGRERENGEYLDVCGVKDRSKVVLIQDPSSIERR 128
>Glyma16g32280.2
Length = 278
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 79/125 (63%), Gaps = 11/125 (8%)
Query: 20 NGNKATPQTEKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSES--HDI 77
+GN+A P +++ WE+RPGGMLVQ R + + + TI V S H++
Sbjct: 28 DGNRAEPGSKE---------WEMRPGGMLVQMRTTDSDRNSALVPTIRVRVKYGSIYHEV 78
Query: 78 SIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPAL 137
+I + +TFGELK +LS T L +Q+LL+K KERD+ +L MVGV++K K++L++DP
Sbjct: 79 NISSQATFGELKKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLVEDPIS 138
Query: 138 KELRV 142
+E R+
Sbjct: 139 QEKRL 143
>Glyma16g32280.1
Length = 307
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 79/125 (63%), Gaps = 11/125 (8%)
Query: 20 NGNKATPQTEKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSES--HDI 77
+GN+A P +++ WE+RPGGMLVQ R + + + TI V S H++
Sbjct: 28 DGNRAEPGSKE---------WEMRPGGMLVQMRTTDSDRNSALVPTIRVRVKYGSIYHEV 78
Query: 78 SIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPAL 137
+I + +TFGELK +LS T L +Q+LL+K KERD+ +L MVGV++K K++L++DP
Sbjct: 79 NISSQATFGELKKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLVEDPIS 138
Query: 138 KELRV 142
+E R+
Sbjct: 139 QEKRL 143
>Glyma09g27100.1
Length = 353
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 32 CRSNSETK-WEIRPGGMLVQKREISNQISGDGMITIIVSTVSES--HDISIEATSTFGEL 88
CRS +K WE+RPGGMLVQ R + + + TI V S H+++I + +TFGEL
Sbjct: 20 CRSEPGSKEWEMRPGGMLVQMRTADSGRNPALLPTIRVKVKFGSIYHEVNISSQATFGEL 79
Query: 89 KMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
K +LS +T L +Q+L +K KERD+ +L +VGV++K K++L++DP +E R+
Sbjct: 80 KKMLSGLTGLHHEDQKLFYKDKERDSKAFLDIVGVKDKSKIVLVEDPISQEKRL 133
>Glyma09g27070.1
Length = 318
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 11/125 (8%)
Query: 20 NGNKATPQTEKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSES--HDI 77
+GN+A P +++ WE+RPGGMLVQ R + + + TI V S H++
Sbjct: 7 DGNRAEPGSKE---------WEMRPGGMLVQMRTADSDRNPALVPTIRVRIKFGSIYHEV 57
Query: 78 SIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPAL 137
+I + +TFGELK +LS T L +Q+L +K KERD+ +L MVGV++K K++L++DP
Sbjct: 58 NISSQATFGELKKMLSGPTGLHHEDQKLFYKDKERDSKAFLDMVGVKDKSKIVLVEDPIS 117
Query: 138 KELRV 142
+E R+
Sbjct: 118 QEKRL 122
>Glyma07g18660.2
Length = 254
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 39 KWEIRPGGMLVQKREIS---NQISGDGMITIIVSTV---SESHDISIEATSTFGELKMIL 92
+WE+RPGGM VQ+RE + M T ++ TV S +D+ + STF ++K +L
Sbjct: 2 EWEMRPGGMFVQRREAAADNGGGGNGNMTTTVLITVVHASSHYDLHLPTNSTFWDVKSLL 61
Query: 93 SLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKE 139
T L+P EQ+L F GKE+DN++ LH GVR+K K+LLL+D + +E
Sbjct: 62 VHRTGLQPEEQQLFFGGKEKDNEDNLHEEGVRDKSKLLLLEDASSEE 108
>Glyma07g18660.1
Length = 254
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 39 KWEIRPGGMLVQKREIS---NQISGDGMITIIVSTV---SESHDISIEATSTFGELKMIL 92
+WE+RPGGM VQ+RE + M T ++ TV S +D+ + STF ++K +L
Sbjct: 2 EWEMRPGGMFVQRREAAADNGGGGNGNMTTTVLITVVHASSHYDLHLPTNSTFWDVKSLL 61
Query: 93 SLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKE 139
T L+P EQ+L F GKE+DN++ LH GVR+K K+LLL+D + +E
Sbjct: 62 VHRTGLQPEEQQLFFGGKEKDNEDNLHEEGVRDKSKLLLLEDASSEE 108
>Glyma05g03520.2
Length = 275
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 38 TKWEIRPGGMLVQKREIS-NQISGD-GMITIIVSTVSESHDISIEATSTFGELKMILSLV 95
+WE+RPGGMLVQKR + NQ S I + V S H I I + ++FGELK +L+
Sbjct: 19 AEWELRPGGMLVQKRNLDLNQNSASKSTIKVKVKYGSSYHQIQISSHASFGELKKMLTEP 78
Query: 96 TSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
T L ++Q+L++K KERD+ YL + V++ K++LL D +E R+
Sbjct: 79 TGLHIQDQKLIYKKKERDSKSYLDVERVKDGSKLVLLVDIESRERRI 125
>Glyma05g03520.1
Length = 275
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 38 TKWEIRPGGMLVQKREIS-NQISGD-GMITIIVSTVSESHDISIEATSTFGELKMILSLV 95
+WE+RPGGMLVQKR + NQ S I + V S H I I + ++FGELK +L+
Sbjct: 19 AEWELRPGGMLVQKRNLDLNQNSASKSTIKVKVKYGSSYHQIQISSHASFGELKKMLTEP 78
Query: 96 TSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
T L ++Q+L++K KERD+ YL + V++ K++LL D +E R+
Sbjct: 79 TGLHIQDQKLIYKKKERDSKSYLDVERVKDGSKLVLLVDIESRERRI 125
>Glyma17g14080.1
Length = 257
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 40 WEIRPGGMLVQKR--EISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVTS 97
WE+RPGGM+VQKR +++ + I + V S H I I + ++FGELK +L+ T
Sbjct: 15 WELRPGGMVVQKRNSDLNQNSASKFTIKVKVKYGSSYHQIQISSHASFGELKKMLTEPTG 74
Query: 98 LEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
L ++Q+L++K KERD+ YL + V++ K++L+ D +E R+
Sbjct: 75 LHVQDQKLIYKKKERDSKSYLDVERVKDGSKLVLVVDIESRERRI 119
>Glyma01g30910.1
Length = 253
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 64 ITIIVSTVSESHDISIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGV 123
I I V S H+ + A STFG++K +L T LEP EQRL F+G E+ ++ +LH+ GV
Sbjct: 32 IKINVMHGSSQHEFHLPAQSTFGDVKKLLVNKTGLEPVEQRLFFRGIEKGDNLHLHLEGV 91
Query: 124 RNKDKVLLLKDPALKELRV 142
++K K+LLL+ A KE ++
Sbjct: 92 KDKSKLLLLEGTASKERKL 110
>Glyma03g06660.1
Length = 250
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 64 ITIIVSTVSESHDISIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGV 123
I I V+ S HD+ + A STFG++K +L T LEP EQRL F+G E+ +++ L GV
Sbjct: 29 IKINVTHGSSHHDLHLPAQSTFGDVKKLLVNKTGLEPAEQRLFFRGIEKGDNQRLQAEGV 88
Query: 124 RNKDKVLLLKDPALKELRV 142
++K K+ LL+ KE ++
Sbjct: 89 KDKSKLFLLEGIGSKERKL 107
>Glyma18g43530.1
Length = 263
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 42 IRPGGMLVQKREISNQI------SGDGMITIIVSTVSESHD--ISIEATSTFGELKMILS 93
+ PGGM VQ+RE + D M T++V+ S + + STF
Sbjct: 1 MSPGGMFVQRREAAAAADNGSAAGNDNMTTVMVTVAHHSSHHHLYLPTNSTF-------- 52
Query: 94 LVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKE 139
+P EQRL F GKE+DN+ +LH GVR+ K+LLL+D +E
Sbjct: 53 ----WDPEEQRLFFGGKEKDNEGHLHAEGVRDMSKLLLLEDACREE 94
>Glyma17g32640.1
Length = 169
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 72 SESHDISIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLL 131
S H I I + ++FGELK +L+ T L ++++L++K KERD+ YL + V++ K++L
Sbjct: 8 SSYHQIQISSHASFGELKKMLTEPTGLHVQDRKLIYKKKERDSKSYLDVERVKDGSKLVL 67
Query: 132 LKDPALKELRV 142
L D +E R+
Sbjct: 68 LVDIESRERRL 78
>Glyma08g23090.1
Length = 107
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 72 SESHDISIEATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLL 131
S H I I + ++FGELK +L+ T L ++++L++K KERD+ YL + V++ K++L
Sbjct: 8 SSYHQIQISSHASFGELKKMLTEPTGLHVQDRKLIYKKKERDSKSYLDVERVKDGSKLVL 67
Query: 132 LKD 134
L D
Sbjct: 68 LVD 70