Miyakogusa Predicted Gene

Lj1g3v3716230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716230.1 tr|G7LBA0|G7LBA0_MEDTR Transcription factor
tfiiib component OS=Medicago truncatula GN=MTR_8g091830
,56.76,0.0000000002,seg,NULL,
NODE_55871_length_750_cov_61.667999.path2.1
         (198 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g43810.1                                                        84   9e-17

>Glyma01g43810.1 
          Length = 131

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 69/121 (57%), Gaps = 25/121 (20%)

Query: 1   MDAFDDILSGAPAPRARRGSKFMPKAKLKQLPQKEISASEHATSSKDGENVPVASSATST 60
           MD FDDIL  AP  R R G+KF+PKAK KQLP+KEI  SEHATSSKD             
Sbjct: 1   MDPFDDILPVAPTARTRPGAKFIPKAKSKQLPRKEIPVSEHATSSKD------------- 47

Query: 61  KSGGIL-NECHDAVASTLSTSAEDSIRSNHRPQEELSNLEDATKS---ASEGLEAGLVTN 116
              GIL NEC +AVA     SAE+S    H  Q E+ N  D+T S   + +G  A LV +
Sbjct: 48  ---GILGNECQNAVA-----SAEESKGFIHHTQVEIPNSGDSTNSKQASVKGDTAALVDD 99

Query: 117 S 117
           S
Sbjct: 100 S 100