Miyakogusa Predicted Gene

Lj1g3v3716220.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716220.1 Non Chatacterized Hit- tr|I1GHV2|I1GHV2_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
GN,38.95,0.00000000000003,PARG_cat,Poly(ADP-ribose) glycohydrolase;
POLY(ADP-RIBOSE) GLYCOHYDROLASE,Poly(ADP-ribose)
glycohydr,gene.g35237.t1.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g01250.1                                                       224   2e-59
Glyma11g01250.2                                                       224   3e-59
Glyma11g01260.1                                                       105   2e-23

>Glyma11g01250.1 
          Length = 786

 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 106/134 (79%), Positives = 117/134 (87%), Gaps = 1/134 (0%)

Query: 1   METSEGKCSNHEIRDSQNDYHRMEQCNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL 60
           MET EG+ SNH+I +SQNDYH M+Q NNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL
Sbjct: 652 METDEGEISNHKITNSQNDYHGMDQGNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL 711

Query: 61  RPFIAYYRFRLEALHNIDKVAHWILSHRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWVLP 120
           RPFIAYY F LEAL ++D+VAHWILS RWTVGDLWNML EYS+NRSKG TNVGFLQW+LP
Sbjct: 712 RPFIAYYTFGLEALQSLDEVAHWILSQRWTVGDLWNMLIEYSINRSKGETNVGFLQWLLP 771

Query: 121 SMY-DDAGMDFSNI 133
           S+Y   A MD  N+
Sbjct: 772 SIYGHGARMDLPNL 785


>Glyma11g01250.2 
          Length = 547

 Score =  224 bits (570), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 106/134 (79%), Positives = 117/134 (87%), Gaps = 1/134 (0%)

Query: 1   METSEGKCSNHEIRDSQNDYHRMEQCNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL 60
           MET EG+ SNH+I +SQNDYH M+Q NNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL
Sbjct: 413 METDEGEISNHKITNSQNDYHGMDQGNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL 472

Query: 61  RPFIAYYRFRLEALHNIDKVAHWILSHRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWVLP 120
           RPFIAYY F LEAL ++D+VAHWILS RWTVGDLWNML EYS+NRSKG TNVGFLQW+LP
Sbjct: 473 RPFIAYYTFGLEALQSLDEVAHWILSQRWTVGDLWNMLIEYSINRSKGETNVGFLQWLLP 532

Query: 121 SMY-DDAGMDFSNI 133
           S+Y   A MD  N+
Sbjct: 533 SIYGHGARMDLPNL 546


>Glyma11g01260.1 
          Length = 321

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 18/109 (16%)

Query: 24  EQCNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQALRPFIAYYRFRLEALHNIDKVA-- 81
           +Q NNIG ATGNWGCG FG DPE+KTIIQWLAASQ+ RPF+A Y   L  L+N+DK+   
Sbjct: 214 DQGNNIGYATGNWGCGVFGRDPEIKTIIQWLAASQSQRPFVACY--TLGKLNNLDKILDP 271

Query: 82  ------------HWILSHRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWV 118
                         IL  R+  GD+W  L EYS+ +S+G  NVGF QW+
Sbjct: 272 RYMAFHIGICIESVILLGRF--GDVWKNLIEYSIIKSRGEINVGFFQWL 318