Miyakogusa Predicted Gene
- Lj1g3v3646360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3646360.1 Non Chatacterized Hit- tr|B9F138|B9F138_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,83.87,0.00000008,P-loop containing nucleoside triphosphate
hydrolases,NULL; PROBABLE ATP-DEPENDENT DNA HELICASE
HFM1,,CUFF.31016.1
(193 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g07850.1 343 6e-95
Glyma15g40460.1 89 2e-18
Glyma08g18490.1 89 2e-18
Glyma14g20430.1 75 3e-14
Glyma06g21970.1 72 3e-13
Glyma18g07510.1 54 9e-08
>Glyma16g07850.1
Length = 893
Score = 343 bits (880), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 165/174 (94%), Positives = 169/174 (97%), Gaps = 1/174 (0%)
Query: 1 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQ+SRGKSAL+FCSTRKGAQEAAQRL
Sbjct: 235 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRL 294
Query: 61 SQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYG-VGYHNGGLCLKDRNIVE 119
SQIVMTFGQSNPFI N EQ DRLREASLS SDKQMQSYILYG VGYHNGGLCLKDR+IVE
Sbjct: 295 SQIVMTFGQSNPFIKNREQQDRLREASLSCSDKQMQSYILYGVVGYHNGGLCLKDRSIVE 354
Query: 120 GLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQV 173
GLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQ+
Sbjct: 355 GLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQM 408
>Glyma15g40460.1
Length = 2183
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 2 RPVKLTTKVFGYAPAK--------NDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGA 53
RPV L+ + G K ND +EK +M + LIF +RK
Sbjct: 717 RPVPLSQQYVGITVKKPLQRFQLMNDICYEK---------VMAVAGKHQVLIFVHSRKET 767
Query: 54 QEAAQRLSQIVMTFGQSNPFI-TNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCL 112
+ A+ + + F+ +S + L + + ++ + YG H+ G+
Sbjct: 768 AKTARAIRDTALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTR 827
Query: 113 KDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQ 172
DR +VE LF G +QVL +T TLA G+NLPAHTV+IK TQ +N EKG + E ++Q
Sbjct: 828 TDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQ 887
Query: 173 VF-------FSRYFTIVLVFLHRILQ 191
+ + Y ++V H LQ
Sbjct: 888 MLGRAGRPQYDSYGEGIIVTGHSELQ 913
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 1 MRPVKLTTKVFGYAPAKNDFLFEKRLQ---NYIFDILMQFSR-GKSALIFCSTRKGAQEA 56
+RPV L + G A FE R+Q + ++Q ++ GK AL+F TRK +
Sbjct: 1555 VRPVPLEIHIQGIDIAN----FEARMQAMTKPTYTAIVQHAKNGKPALVFVPTRKHVRLT 1610
Query: 57 AQRLSQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRN 116
A L PF+ S + L ++D+ ++ + GVGY + GL DR+
Sbjct: 1611 AVDLITYSGADSGEKPFLLRSAE--ELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDRD 1668
Query: 117 IVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
IV LF G IQV +++ G+ L AH VV+ TQ+++ + +Y + +LQ+
Sbjct: 1669 IVTQLFEAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMM 1726
>Glyma08g18490.1
Length = 2183
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 2 RPVKLTTKVFGYAPAK--------NDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGA 53
RPV L+ + G K ND +EK +M + LIF +RK
Sbjct: 717 RPVPLSQQYVGITVKKPLQRFQLMNDICYEK---------VMAVAGKHQVLIFVHSRKET 767
Query: 54 QEAAQRLSQIVMTFGQSNPFI-TNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCL 112
+ A+ + + F+ +S + L + + ++ + YG H+ G+
Sbjct: 768 AKTARAIRDAALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTR 827
Query: 113 KDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQ 172
DR +VE LF G +QVL +T TLA G+NLPAHTV+IK TQ +N EKG + E ++Q
Sbjct: 828 TDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQ 887
Query: 173 VF-------FSRYFTIVLVFLHRILQ 191
+ + Y ++V H LQ
Sbjct: 888 MLGRAGRPQYDSYGEGIIVTGHSELQ 913
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 1 MRPVKLTTKVFGYAPAKNDFLFEKRLQ---NYIFDILMQFSR-GKSALIFCSTRKGAQEA 56
+RPV L + G FE R+Q + ++Q ++ GK ALIF TRK +
Sbjct: 1555 VRPVPLEIHIQGIDITN----FEARMQAMTKPTYTAIVQHAKNGKPALIFVPTRKHVRLT 1610
Query: 57 AQRLSQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRN 116
A + PF+ S + L ++D+ ++ + GVGY + GL D +
Sbjct: 1611 AVDMITYSGADSGEKPFLLRSAE--ELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDHD 1668
Query: 117 IVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
IV LF G IQV +++ G+ L AH VV+ TQ+++ + +Y + +LQ+
Sbjct: 1669 IVTQLFEAGWIQVCVLNSSMCWGVTLLAHLVVVMGTQYYDGRENAQTDYPVTDLLQMM 1726
>Glyma14g20430.1
Length = 1824
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 40 GKSALIFCSTRKGAQEAAQRLSQIVMTF---GQSNPFITNSEQIDRLREASLSLSDKQMQ 96
G S LIFCS+RKG + A+ +++ + +F F + I+ L + L D +Q
Sbjct: 507 GHSVLIFCSSRKGCESTARHIAKFLKSFTVDANDCEFADITSAINSLGKCPAGL-DPILQ 565
Query: 97 SYILYGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIK 150
+ GV +H+ GL +++R IVE + KG ++VL T+TLA G+NLPA V+ +
Sbjct: 566 ETLPSGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFR 619
>Glyma06g21970.1
Length = 1178
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 1 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
+RPV L GY P K + + + S K LIF S+R+ + A L
Sbjct: 730 VRPVPLE----GY-PGKYYCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDL 784
Query: 61 SQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
Q + QS F+ E+ L+ +SD ++ + +G+G H+ GL KDR+++
Sbjct: 785 IQFAASDEQSRQFLNLPEET--LQMVLSQVSDLNLRHTLQFGIGLHHAGLNDKDRSLI-- 840
Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
L T+TLA G+NLPAH V+IK T++++ + Y+++ + ILQ+
Sbjct: 841 ---------LVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDILQMM 885
>Glyma18g07510.1
Length = 1348
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 44 LIFCSTRKGAQEAAQRLSQIVMTFGQSNPFIT--NSEQIDRLREASLSLSDK-QMQSYIL 100
+IFC ++ ++A L+ +T I + RL+ + +L ++Q+ +
Sbjct: 651 VIFCFSKNRCDKSADSLTGTDLTSSSEKSEIRLFCDKAFSRLKGSDKNLPQVVRVQNLLR 710
Query: 101 YGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFN 156
G+G H+ GL + +VE LF +G I+VL +T T A G+N PA TVV + + F+
Sbjct: 711 RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFD 766