Miyakogusa Predicted Gene

Lj1g3v3608420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3608420.2 Non Chatacterized Hit- tr|K4CW72|K4CW72_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,68.49,0,NUCLEOLAR GTP-BINDING PROTEIN 1,NULL; DEVELOPMENTALLY
REGULATED GTP-BINDING PROTEIN-RELATED,NULL; P-,CUFF.30976.2
         (435 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45370.1                                                       506   e-143
Glyma12g06170.1                                                       121   2e-27
Glyma11g14190.2                                                       120   3e-27
Glyma11g14190.1                                                       120   3e-27
Glyma13g10670.1                                                        92   1e-18
Glyma04g35690.1                                                        83   7e-16
Glyma01g20940.1                                                        72   2e-12
Glyma20g21470.1                                                        67   3e-11
Glyma01g21630.1                                                        62   1e-09
Glyma13g28800.1                                                        55   1e-07
Glyma15g10260.1                                                        52   9e-07
Glyma01g35080.1                                                        52   9e-07

>Glyma08g45370.1 
          Length = 309

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/304 (80%), Positives = 273/304 (89%), Gaps = 2/304 (0%)

Query: 1   MKASSSFLLKTHI-PSSILLLTSSKVKPSAKLHPNLCFFCKSIQTDSYQVADGSYVPTLD 59
           MKA SS  LK H+ PSSI LL +SK  P+ K+HP  C  CK+IQT+SY++++GSY PT+ 
Sbjct: 1   MKAPSSLFLKGHVLPSSIFLLRNSKGTPNVKMHPIWCL-CKAIQTNSYEISNGSYHPTVQ 59

Query: 60  PTNQNKTMERPPRTVESIGAFQKLPIVMPSIDILGSALRKAKRVPPTKGIPNIAKRERNK 119
            T + KTME+  R VESIGAFQKLPIVMPSIDI+GSALRKA++V PTKGI NIAKRE+NK
Sbjct: 60  QTTEKKTMEKLSRKVESIGAFQKLPIVMPSIDIIGSALRKARKVSPTKGIANIAKREKNK 119

Query: 120 GAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRV 179
           GAKQLDALMKE+AVPLRTYVENFPNK HLHPYERSL+ELTLGDG+YE VLR VD LRKRV
Sbjct: 120 GAKQLDALMKEIAVPLRTYVENFPNKMHLHPYERSLIELTLGDGYYEMVLRKVDSLRKRV 179

Query: 180 VLVGKEQASLCAKSTTKREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINL 239
           V VGKE ASLCAKS++KREAEERLNEGLKKIEEIFAQER+VVD+LL IAKTLRAMPVINL
Sbjct: 180 VSVGKEHASLCAKSSSKREAEERLNEGLKKIEEIFAQERKVVDDLLGIAKTLRAMPVINL 239

Query: 240 ETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLL 299
           ETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHI+LN+QKFQVTDTPGLL
Sbjct: 240 ETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIILNFQKFQVTDTPGLL 299

Query: 300 KRHD 303
           +RHD
Sbjct: 300 RRHD 303


>Glyma12g06170.1 
          Length = 636

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 5/290 (1%)

Query: 80  FQKLPIVMPSIDILGSALRKAKRVPPT---KGIPNIAKRERNKGAKQLDALMKELAVPLR 136
           F+K+ +V    D++   L + +R  PT   KG      R R    +++    +     L 
Sbjct: 6   FKKITVVPNGKDVVDIILSRTQRQTPTVVHKGYA--ISRLRQFYMRKVKYTQQNFHDKLS 63

Query: 137 TYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTTK 196
           T ++ FP    +HP+   L+ +     HY+  L  ++  R  +  + K+   L     + 
Sbjct: 64  TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSL 123

Query: 197 REAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSS 256
              +      L ++  +  +    +  L  + + +  +P I+  T T+ + G PNVGKSS
Sbjct: 124 YRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTILICGYPNVGKSS 183

Query: 257 LVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNLEKLTLAV 316
            ++ ++    ++  Y FTT+ + +GH    Y ++QV DTPG+L R  +DRN +E  ++  
Sbjct: 184 FINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243

Query: 317 LSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDL 366
           L+HL  A+L+  D++G CG S + Q +++  +K  F     + V +K+DL
Sbjct: 244 LAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293


>Glyma11g14190.2 
          Length = 674

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 5/290 (1%)

Query: 80  FQKLPIVMPSIDILGSALRKAKRVPPT---KGIPNIAKRERNKGAKQLDALMKELAVPLR 136
           F+K+ +V    D++   L + +R  PT   KG      R R    +++    +     L 
Sbjct: 6   FKKITVVPNGKDVVDIILSRTQRQTPTVVHKGYA--ISRLRQFYMRKVKYTQQNFHDKLS 63

Query: 137 TYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTTK 196
           T ++ FP    +HP+   L+ +     HY+  L  ++  R  +  + K+   L     + 
Sbjct: 64  TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSL 123

Query: 197 REAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSS 256
              +      L ++  +  +    +  L  + + +  +P I+  T T+ + G PNVGKSS
Sbjct: 124 YRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSS 183

Query: 257 LVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNLEKLTLAV 316
            ++ ++    ++  Y FTT+ + +GH    Y ++QV DTPG+L R  +DRN +E  ++  
Sbjct: 184 FINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243

Query: 317 LSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDL 366
           L+HL  A+L+  D++G CG S + Q +++  +K  F     + V +K+DL
Sbjct: 244 LAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293


>Glyma11g14190.1 
          Length = 674

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 5/290 (1%)

Query: 80  FQKLPIVMPSIDILGSALRKAKRVPPT---KGIPNIAKRERNKGAKQLDALMKELAVPLR 136
           F+K+ +V    D++   L + +R  PT   KG      R R    +++    +     L 
Sbjct: 6   FKKITVVPNGKDVVDIILSRTQRQTPTVVHKGYA--ISRLRQFYMRKVKYTQQNFHDKLS 63

Query: 137 TYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTTK 196
           T ++ FP    +HP+   L+ +     HY+  L  ++  R  +  + K+   L     + 
Sbjct: 64  TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSL 123

Query: 197 REAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSS 256
              +      L ++  +  +    +  L  + + +  +P I+  T T+ + G PNVGKSS
Sbjct: 124 YRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSS 183

Query: 257 LVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNLEKLTLAV 316
            ++ ++    ++  Y FTT+ + +GH    Y ++QV DTPG+L R  +DRN +E  ++  
Sbjct: 184 FINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243

Query: 317 LSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDL 366
           L+HL  A+L+  D++G CG S + Q +++  +K  F     + V +K+DL
Sbjct: 244 LAHLRAAILFFLDVSGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293


>Glyma13g10670.1 
          Length = 149

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 76/133 (57%)

Query: 234 MPVINLETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVT 293
           +P I+  T T+ + G PNVGKSS +  +     ++  Y FTT+ + +GH    Y ++QV 
Sbjct: 4   LPSIDPNTTTILIYGYPNVGKSSFIKKIRRANVDVQPYAFTTKSLFVGHTDYKYLRYQVI 63

Query: 294 DTPGLLKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFT 353
           D P +L R  +D N +E  ++  L+HL  A+L++ D++G CG S + Q +++   K  F 
Sbjct: 64  DMPWILDRPFEDCNIIEMCSITALAHLRAAMLFILDVSGCCGYSIAQQAALFHSTKSLFM 123

Query: 354 GHLWLNVVSKSDL 366
               + V +K+DL
Sbjct: 124 NKPLIIVCNKTDL 136


>Glyma04g35690.1 
          Length = 253

 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 11/133 (8%)

Query: 234 MPVINLETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVT 293
           +P I+  T T+ + G PNVGKSS ++ +     ++  Y FTT+ + +GHI   Y ++QV 
Sbjct: 53  LPSIDPNTRTVLICGYPNVGKSSFINKIMRVDVDVQPYAFTTKSLFVGHIDYKYMRYQVI 112

Query: 294 DTPGLLKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFT 353
           DTPG+L R  +D N +E  ++  L+HL  A+L+  DL             ++ ++K  F 
Sbjct: 113 DTPGILDRPFEDYNIIEMCSITALTHLRAAILFFLDLA-----------VLFHNIKSLFM 161

Query: 354 GHLWLNVVSKSDL 366
               + V +K+DL
Sbjct: 162 NKSLIIVCNKTDL 174


>Glyma01g20940.1 
          Length = 127

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 234 MPVINLETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVT 293
           +P I+  T T+ + G PNVG+S  ++ +     ++  Y FTT+ + +GHI   Y ++QV 
Sbjct: 4   LPSIDPNTSTVLIYGYPNVGESLFINKIMRANVDVQPYAFTTKSLFVGHIDYKYLRYQVI 63

Query: 294 DTPGLLKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERF 352
           D      +  +D N +E  ++  L+HL  A+L++ D++G  G S + Q +++  +K  F
Sbjct: 64  DRD--FGQAFEDFNIIEMCSITALAHLRAAMLFILDVSGSYGYSIAQQVALFHSIKSLF 120


>Glyma20g21470.1 
          Length = 218

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 12/130 (9%)

Query: 237 INLETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTP 296
           I+  T  + + G PNVGKSS ++ ++    ++  Y FTT+ + +GH    Y ++QV DTP
Sbjct: 80  IDPNTRIILIYGYPNVGKSSFINKITRVDVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTP 139

Query: 297 GLLKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHL 356
           G+L    +D N +E  ++  L++L  A+L+  D              ++  +K  F    
Sbjct: 140 GILDWPFEDCNIIEMCSITALAYLRAAILFFLDAV------------LFHSIKFLFMNKP 187

Query: 357 WLNVVSKSDL 366
            + V SK+DL
Sbjct: 188 LIIVCSKNDL 197


>Glyma01g21630.1 
          Length = 96

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 244 LCLVGAPNVGKS-SLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRH 302
           +C+V    VG S + +  ++    ++  Y FTT+   +GH    Y ++QV DTP +L R 
Sbjct: 1   MCIV-IKRVGASLAYLEQITRADVDVHPYAFTTKSFFVGHTNCKYLRYQVIDTPRILDRP 59

Query: 303 DDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTS 337
            +D N +E  ++  L+HL  A+L++ D+ G CG S
Sbjct: 60  FEDCNIIEMCSITTLAHLRAAILFILDVFGSCGYS 94


>Glyma13g28800.1 
          Length = 595

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 244 LCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQK-FQVTDTPGLLK 300
           + +VGAPN GKS+L+ V+S  KP + NYPFTT    +G +  +Y     V D PGLL+
Sbjct: 298 VGIVGAPNAGKSTLLSVVSAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLE 355


>Glyma15g10260.1 
          Length = 440

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 246 LVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQK-FQVTDTPGLLK 300
           +VGAPN GKS+L+ V+   KP + NYPFTT    +G +  +Y     V D PGLL+
Sbjct: 163 IVGAPNAGKSTLLSVVCAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLE 218


>Glyma01g35080.1 
          Length = 319

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 14/107 (13%)

Query: 244 LCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVT--DTPGLLKR 301
           +  VG PN GKS+L+  +S  KP + +Y FTT    +G+  LNY    +T  D PGL+K 
Sbjct: 134 VSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGN--LNYDDLSITVADIPGLIKG 191

Query: 302 HDDDRNNLEKLTLAVLSHLP-TAVL-YVHDLT----GECGTSPSDQF 342
              +R     L  A L H+  T VL YV DL     G  G  P +Q 
Sbjct: 192 AHQNRG----LGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQL 234