Miyakogusa Predicted Gene

Lj1g3v3597200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3597200.1 tr|G7KWY6|G7KWY6_MEDTR D-amino acid dehydrogenase
small subunit OS=Medicago truncatula GN=MTR_7g0512,81.24,0,SARCOSINE
DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (SARDH)(EC 1.5.99.1)(BPR-2)
SO,NULL; FAD NAD BINDI,CUFF.30949.1
         (481 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45720.1                                                       685   0.0  
Glyma08g45720.2                                                       621   e-178
Glyma01g25790.1                                                       197   2e-50

>Glyma08g45720.1 
          Length = 465

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/415 (79%), Positives = 373/415 (89%)

Query: 67  QEFDVVIVGAGIIGLTIARQFLLGSDLSIAIVDKGVPCSGATGAGQGYLWMTHKTPGSDI 126
           Q +DVV+VGAG+IGLTIAR FL+ SDLS+A+VDK VPCSGATGAGQG+LWM +KTPGS  
Sbjct: 51  QAYDVVVVGAGVIGLTIARHFLVSSDLSVAVVDKAVPCSGATGAGQGHLWMVNKTPGSAT 110

Query: 127 WDLTWRSHQLWKMLAGSLEEQGLDPTLELGWKKTGSLLVGRTHAESDMLKGRVKQLSAAG 186
           WDL  RSHQLWK L  S+EEQGLDP +ELGWK++GSLL+GRT AESD+LKGRVK L  AG
Sbjct: 111 WDLASRSHQLWKTLVQSIEEQGLDPMVELGWKQSGSLLIGRTDAESDVLKGRVKLLCEAG 170

Query: 187 LKAEYLCTSDLFKQEPDLLVEKDSAAAFLPDDCQLDAHRTVAYIEKANRNFASKGRYAEF 246
           LKAEYLC+SDL K+EPDLLV+KDSAAAFLPDDCQ+DA+RTVAYIEK NR+FASKGRY EF
Sbjct: 171 LKAEYLCSSDLIKEEPDLLVDKDSAAAFLPDDCQIDAYRTVAYIEKTNRSFASKGRYTEF 230

Query: 247 YDDPVQCFIRSDSNGDIKAVRTSKNTLYSKKAIIVATGCWTGCLMEDLLRNWGVELHVPV 306
           YDDPV+CFIRSDSNG++KAV+TSKNT+YSKKA+IVA GCWTG LM+DL RNWG++LHVPV
Sbjct: 231 YDDPVKCFIRSDSNGEVKAVQTSKNTIYSKKAVIVAAGCWTGSLMQDLFRNWGMDLHVPV 290

Query: 307 RPRKGHLLEVQNFNFLQLNHGLMEAGYVDHPTISGLESSDHGRNFSVSMTATVDAAGNLL 366
            PRKGHLL VQNFNFLQ+NHGLMEA Y++HPTISG ES DH +N SVSM A++DAAGNLL
Sbjct: 291 MPRKGHLLVVQNFNFLQMNHGLMEADYLNHPTISGSESPDHQKNLSVSMVASIDAAGNLL 350

Query: 367 IGSSREFAGFNTDLDESVVSYIWKRVGEFFPKLKMLSLSDLSADRKVRVGLRPYMPDGKP 426
           +GSSREF GFNT+LDESVVSYIWKRVGEFFPKLK L LSDLSA RKVR+GLRPYMP+GKP
Sbjct: 351 LGSSREFVGFNTNLDESVVSYIWKRVGEFFPKLKTLPLSDLSASRKVRIGLRPYMPNGKP 410

Query: 427 MIGPVPGLSNVYLAAGHEGGGLSMALGTAEMVVDMVLGCLGKVDSAPFAVDRVLV 481
           +IGPVPGLSNVYLAAGHEG GL MALGTAEM+V+MVLG   KVDS PFAV +VLV
Sbjct: 411 VIGPVPGLSNVYLAAGHEGSGLLMALGTAEMIVEMVLGYPAKVDSTPFAVQKVLV 465


>Glyma08g45720.2 
          Length = 365

 Score =  621 bits (1602), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/365 (79%), Positives = 327/365 (89%)

Query: 117 MTHKTPGSDIWDLTWRSHQLWKMLAGSLEEQGLDPTLELGWKKTGSLLVGRTHAESDMLK 176
           M +KTPGS  WDL  RSHQLWK L  S+EEQGLDP +ELGWK++GSLL+GRT AESD+LK
Sbjct: 1   MVNKTPGSATWDLASRSHQLWKTLVQSIEEQGLDPMVELGWKQSGSLLIGRTDAESDVLK 60

Query: 177 GRVKQLSAAGLKAEYLCTSDLFKQEPDLLVEKDSAAAFLPDDCQLDAHRTVAYIEKANRN 236
           GRVK L  AGLKAEYLC+SDL K+EPDLLV+KDSAAAFLPDDCQ+DA+RTVAYIEK NR+
Sbjct: 61  GRVKLLCEAGLKAEYLCSSDLIKEEPDLLVDKDSAAAFLPDDCQIDAYRTVAYIEKTNRS 120

Query: 237 FASKGRYAEFYDDPVQCFIRSDSNGDIKAVRTSKNTLYSKKAIIVATGCWTGCLMEDLLR 296
           FASKGRY EFYDDPV+CFIRSDSNG++KAV+TSKNT+YSKKA+IVA GCWTG LM+DL R
Sbjct: 121 FASKGRYTEFYDDPVKCFIRSDSNGEVKAVQTSKNTIYSKKAVIVAAGCWTGSLMQDLFR 180

Query: 297 NWGVELHVPVRPRKGHLLEVQNFNFLQLNHGLMEAGYVDHPTISGLESSDHGRNFSVSMT 356
           NWG++LHVPV PRKGHLL VQNFNFLQ+NHGLMEA Y++HPTISG ES DH +N SVSM 
Sbjct: 181 NWGMDLHVPVMPRKGHLLVVQNFNFLQMNHGLMEADYLNHPTISGSESPDHQKNLSVSMV 240

Query: 357 ATVDAAGNLLIGSSREFAGFNTDLDESVVSYIWKRVGEFFPKLKMLSLSDLSADRKVRVG 416
           A++DAAGNLL+GSSREF GFNT+LDESVVSYIWKRVGEFFPKLK L LSDLSA RKVR+G
Sbjct: 241 ASIDAAGNLLLGSSREFVGFNTNLDESVVSYIWKRVGEFFPKLKTLPLSDLSASRKVRIG 300

Query: 417 LRPYMPDGKPMIGPVPGLSNVYLAAGHEGGGLSMALGTAEMVVDMVLGCLGKVDSAPFAV 476
           LRPYMP+GKP+IGPVPGLSNVYLAAGHEG GL MALGTAEM+V+MVLG   KVDS PFAV
Sbjct: 301 LRPYMPNGKPVIGPVPGLSNVYLAAGHEGSGLLMALGTAEMIVEMVLGYPAKVDSTPFAV 360

Query: 477 DRVLV 481
            +VLV
Sbjct: 361 QKVLV 365


>Glyma01g25790.1 
          Length = 159

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/197 (53%), Positives = 133/197 (67%), Gaps = 40/197 (20%)

Query: 111 GQGYLWMTHKTPGSDIWDLTWRSHQLWKMLAGSLEEQGLDPTLELGWKKTGSLLVGRTHA 170
           GQG+LWM +KTPGS  WDL  RSHQLWK L  S+EEQGLDP +EL WK++GSLL+GRT+A
Sbjct: 1   GQGHLWMVNKTPGSATWDLASRSHQLWKTLVQSIEEQGLDPMVELNWKQSGSLLIGRTNA 60

Query: 171 ESDMLKGRVKQLSAAGLKAEYLCTSDLFKQEPDLLVEKDSA--AAFLPDDCQLDAHRTVA 228
           ESDMLKGR            YLC+SDL K+EPDLLV+KD+   A  LP+D +L     VA
Sbjct: 61  ESDMLKGR------------YLCSSDLIKEEPDLLVDKDNQFLATLLPNDLRL----IVA 104

Query: 229 YIEKANRNFASKGRYAEFYDDPVQCFIRSDSNGDIKAVRTSKNTLYSKKAIIVATGCWTG 288
            +                    + C+  S+SNG++K V+TSKNT++SKKA+IVA GCWTG
Sbjct: 105 NL--------------------LLCW--SNSNGEVKVVQTSKNTIHSKKAVIVAAGCWTG 142

Query: 289 CLMEDLLRNWGVELHVP 305
            L+ DL RN G++LHVP
Sbjct: 143 SLIHDLFRNSGMDLHVP 159