Miyakogusa Predicted Gene

Lj1g3v3593840.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3593840.1 Non Chatacterized Hit- tr|I1KZ01|I1KZ01_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30298
PE,70.18,0.0000000000002, ,NODE_40728_length_325_cov_35.646152.path2.1
         (56 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45910.1                                                        80   4e-16

>Glyma08g45910.1 
          Length = 510

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 48/57 (84%), Gaps = 1/57 (1%)

Query: 1  MNRVLKKTVSNVCALKITRKSFC-TEVVKVAGSTTGDPSNEHGKKQSISKSIPEYDI 56
          MNRV+KKTVSN+CALK+ RKSFC TE VKVAG +  + SN+H KKQ+ISK IP+YDI
Sbjct: 1  MNRVIKKTVSNICALKVPRKSFCSTEGVKVAGCSIPEVSNDHEKKQAISKVIPQYDI 57