Miyakogusa Predicted Gene

Lj1g3v3580580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580580.1 tr|D7L5W0|D7L5W0_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899120
PE,32.54,0.000000000005,seg,NULL,CUFF.30903.1
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g32880.1                                                       212   1e-55
Glyma08g46140.1                                                       207   4e-54

>Glyma18g32880.1 
          Length = 150

 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/148 (72%), Positives = 122/148 (82%)

Query: 1   MLVLLLKPITFVVVTLWSVLTRLIFNTIARTIVLLIQGLKQSGEGSLGIFQHVAEIIRSC 60
           MLVLLLK +TFVVVTLWS+LTRLIFNTIA TIVLL+QGLK SGEGSLGIFQ VA+ IR C
Sbjct: 1   MLVLLLKSVTFVVVTLWSLLTRLIFNTIAYTIVLLLQGLKGSGEGSLGIFQQVADGIRGC 60

Query: 61  FEFILQMXXXXXXXXXXXXXXXLKESITGSVSATGSVAGELAEKFKTTLEESLNQVPELF 120
           FEFILQ+               LKESITGSV+A+GSVA ELAEK KT+L+ESL QVP+LF
Sbjct: 61  FEFILQITISSINSIISNVFDILKESITGSVAASGSVAAELAEKLKTSLKESLKQVPQLF 120

Query: 121 EELSDMISNMVTELWNNYKGALGYVTEN 148
           EELS+M+S MV ELW+NYKGA+GYVTEN
Sbjct: 121 EELSNMMSEMVKELWDNYKGAVGYVTEN 148


>Glyma08g46140.1 
          Length = 150

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 119/148 (80%)

Query: 1   MLVLLLKPITFVVVTLWSVLTRLIFNTIARTIVLLIQGLKQSGEGSLGIFQHVAEIIRSC 60
           MLVLLLK  TFVVVTLWS+LTRLIFNTIA TIVLL+QGLK S EGSLGIFQ VAE IR C
Sbjct: 1   MLVLLLKSATFVVVTLWSLLTRLIFNTIAYTIVLLLQGLKGSSEGSLGIFQQVAEGIRGC 60

Query: 61  FEFILQMXXXXXXXXXXXXXXXLKESITGSVSATGSVAGELAEKFKTTLEESLNQVPELF 120
           FEFILQ+               LKESITGS++A+GSVA ELAEK KT+LEESL QVP+LF
Sbjct: 61  FEFILQIIISSINSIISKVFDVLKESITGSMAASGSVAAELAEKLKTSLEESLKQVPQLF 120

Query: 121 EELSDMISNMVTELWNNYKGALGYVTEN 148
           EELS+M+S MV ELW+NYKGA+GYV EN
Sbjct: 121 EELSNMMSEMVKELWDNYKGAVGYVKEN 148