Miyakogusa Predicted Gene
- Lj1g3v3580540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3580540.1 Non Chatacterized Hit- tr|D8RJ88|D8RJ88_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.73,0.00000000003,Tetrahydrobiopterin biosynthesis
enzymes-like,NULL; GTP_cyclohydroI,GTP cyclohydrolase I/Nitrile
oxi,CUFF.30896.1
(325 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g46160.1 540 e-154
Glyma03g21540.1 390 e-108
Glyma03g20870.1 261 8e-70
Glyma18g11770.1 107 1e-23
Glyma18g32930.1 97 3e-20
Glyma16g10940.1 93 4e-19
Glyma19g24430.1 92 6e-19
Glyma11g32420.1 91 2e-18
Glyma04g11670.1 89 4e-18
Glyma18g32920.1 86 6e-17
Glyma16g10950.1 82 6e-16
Glyma04g11890.1 80 2e-15
Glyma03g20880.1 67 3e-11
Glyma13g02320.1 51 2e-06
>Glyma08g46160.1
Length = 457
Score = 540 bits (1391), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/321 (82%), Positives = 280/321 (87%), Gaps = 13/321 (4%)
Query: 1 MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
MGCL DG F V++ NG +NG E +EDAVKVLL GLGED+NREGLRKTPL
Sbjct: 1 MGCLGDGRFAVEIRNGVSNGCGE-----------VEDAVKVLLEGLGEDVNREGLRKTPL 49
Query: 61 RVAKALREGTRGYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCL 120
RVAKALREGTRGY+ KVKDIVQGALFPEAGLDN VGHAGGAGGLVIVRDLDLFSYCESCL
Sbjct: 50 RVAKALREGTRGYRQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCL 109
Query: 121 LPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAI 180
LPF VKCHVGYVPSG RVVGLSKLSRVA+VFAKRLQEPQRLADEVCSALH GIKPAGVAI
Sbjct: 110 LPFPVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEVCSALHRGIKPAGVAI 169
Query: 181 ILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVEN 240
ILQCTHIHFPDIE FLDSN+QGWVKILVSSGSGVFENKN DVW DFF LLKFRGIN++
Sbjct: 170 ILQCTHIHFPDIEPVFLDSNHQGWVKILVSSGSGVFENKNADVWDDFFGLLKFRGINMDK 229
Query: 241 FHFRGPSDPCWCPSESSLSAK--SKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRF 298
H RG SDPCWCPS+SSLSAK SKI P NPVMV+A+ASII+ LGEDPLRKEL GTP RF
Sbjct: 230 IHLRGSSDPCWCPSQSSLSAKVSSKIGPVNPVMVTAVASIIESLGEDPLRKELIGTPSRF 289
Query: 299 VKWLMNFQNSNLDMKLNGFLC 319
VKWLMNFQNSN DMKLNGFLC
Sbjct: 290 VKWLMNFQNSNFDMKLNGFLC 310
>Glyma03g21540.1
Length = 459
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/308 (64%), Positives = 235/308 (76%), Gaps = 10/308 (3%)
Query: 13 LENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPLRVAKALREGTRG 72
L+NG E S +E N +IE AVKVLL+ LGEDINREG+ KTP RVAKAL EGTRG
Sbjct: 13 LKNGVNMCCDEESFVKEINTTSIEYAVKVLLMDLGEDINREGIIKTPHRVAKALFEGTRG 72
Query: 73 YKLKVKDIVQGALFPEAGLDNS-VGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGY 131
YK K+IV+GALFPEAG+D++ VGHAG LVIVRDL+ +SYCESC+LPF KCHVGY
Sbjct: 73 YKQSAKEIVEGALFPEAGVDSTKVGHAGE---LVIVRDLEFYSYCESCMLPFYFKCHVGY 129
Query: 132 VPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAIILQCTHIHFPD 191
VPSG RV+GLSKLSRV VFAKR QEPQRLA+EVCSALH GI+PAGVA++LQCTHI+ PD
Sbjct: 130 VPSGQRVLGLSKLSRVTNVFAKRFQEPQRLANEVCSALHQGIEPAGVAVVLQCTHINIPD 189
Query: 192 IESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVENFHFRGPSDPCW 251
ES F DSN++G V+ LVSSGSGVFEN + D W D F LLK RGI+ + H + D W
Sbjct: 190 TESNFFDSNHKGLVETLVSSGSGVFENNDADTWGDVFGLLKVRGIDKDKVHVKRSLDQHW 249
Query: 252 CPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFVKWLMNFQNSN-L 310
CPS S SKI NP+M++A++SI+K LGEDP+RKEL GTP R+ KWLMNFQ N +
Sbjct: 250 CPSLS-----SKIGEINPIMITAVSSILKSLGEDPIRKELVGTPSRYAKWLMNFQYCNDI 304
Query: 311 DMKLNGFL 318
+KLNG L
Sbjct: 305 YVKLNGSL 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 32 NATIEDAVKVLLLGLGEDINREGLRKTPLRVAKALREGTRGYKLKVKDIVQGALFPEAGL 91
N + AV +L LGED R+ L TP R AK L + VK + G+L +G+
Sbjct: 261 NPIMITAVSSILKSLGEDPIRKELVGTPSRYAKWLMNFQYCNDIYVK--LNGSL--RSGV 316
Query: 92 DNSVGHAGGAGGL---VIVRDLDL--FSYCESCLLPFQVKCHVGY-VPSGGRVVGLSKLS 145
D+S+ H G + DL+L +S CE LLPF H+GY +P G V S L
Sbjct: 317 DDSL-HTNGEVSFDDKELHSDLNLPFWSQCEHHLLPFHGVVHIGYFIPKGFHPVEKSLLQ 375
Query: 146 RVAEVFAKRLQEPQRLADEVCSALH--LGIKPAGVAIILQCTH 186
+ + +LQ +RL ++ + LG V ++++ +H
Sbjct: 376 SIVHFYGFKLQVQERLTKQIAETVSPLLG---GNVIVVVEASH 415
>Glyma03g20870.1
Length = 306
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 155/200 (77%), Gaps = 11/200 (5%)
Query: 120 LLPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVA 179
+LPF KCHVGYVPSG RV+GLSKLSRV VFAKRLQEPQRLADEVC ALH GI+PAGVA
Sbjct: 1 MLPFYFKCHVGYVPSGQRVLGLSKLSRVTNVFAKRLQEPQRLADEVCFALHQGIEPAGVA 60
Query: 180 IILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVE 239
++LQCTHI+ PD D+N++G V+ LVSSGSGVFENK+ D+W D F LLKFRGI+ +
Sbjct: 61 VVLQCTHINIPD---TVFDTNHKGLVETLVSSGSGVFENKDADMWGDVFGLLKFRGIDKD 117
Query: 240 NFHFRGPSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFV 299
H +G D WCPS S SKI NP+MV+A++SI+K LGEDP RKEL GTP R+V
Sbjct: 118 KVHVKGSLDQYWCPSLS-----SKIGEINPIMVTAVSSILKSLGEDPTRKELVGTPSRYV 172
Query: 300 KWLMNFQN-SNLD--MKLNG 316
KWLMNFQ S++D +KLNG
Sbjct: 173 KWLMNFQYCSDIDGKLKLNG 192
>Glyma18g11770.1
Length = 211
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 26/117 (22%)
Query: 179 AIILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINV 238
A +++C ++ DIES +LDSN+QGW+KILV S GVFENKN D W DF +LLKFRGIN+
Sbjct: 63 APLIRCFYL---DIESVYLDSNHQGWLKILVVSCFGVFENKNADAWTDFVTLLKFRGINM 119
Query: 239 ENFHFRGPSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTP 295
+ KI ANP++V+ + SII+ LGE PLRKEL GTP
Sbjct: 120 D-----------------------KIGHANPIIVTVVTSIIEPLGEYPLRKELIGTP 153
>Glyma18g32930.1
Length = 71
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 1 MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
MGC+ DG FTV+++NG +NG E+ + +G A IEDAVKVLL GLGED+NREGLRKTPL
Sbjct: 1 MGCVIDGRFTVEIQNGVSNGCGEVGLWNDGGGA-IEDAVKVLLEGLGEDVNREGLRKTPL 59
Query: 61 RVAKALREGTRG 72
RVAKAL EGTRG
Sbjct: 60 RVAKALHEGTRG 71
>Glyma16g10940.1
Length = 58
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 47/58 (81%)
Query: 204 WVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVENFHFRGPSDPCWCPSESSLSAK 261
WVK LV SGSG+FENK+ D W+DFF LL+FRGI +EN H RG SD CWCPS ++LSAK
Sbjct: 1 WVKTLVLSGSGIFENKSEDAWSDFFCLLRFRGIKIENIHLRGSSDQCWCPSLTALSAK 58
>Glyma19g24430.1
Length = 70
Score = 92.4 bits (228), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/49 (83%), Positives = 44/49 (89%)
Query: 73 YKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCLL 121
Y+ KVKDIVQGALFPE GLDN +GHAGG GGLVIV+DLDLFSYCE CLL
Sbjct: 14 YRQKVKDIVQGALFPEVGLDNRLGHAGGVGGLVIVQDLDLFSYCEFCLL 62
>Glyma11g32420.1
Length = 52
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 46/50 (92%)
Query: 72 GYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCLL 121
GY+ KVKDIVQGALFPEAG+DN VGHAGG GGLVIV+DLDLFSYCE CLL
Sbjct: 1 GYRQKVKDIVQGALFPEAGIDNRVGHAGGVGGLVIVQDLDLFSYCEFCLL 50
>Glyma04g11670.1
Length = 52
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 72 GYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCLL 121
GY+ KVKDIVQGALFPEAGLDN VGHA G GGLVIV+DLDL SYCESCLL
Sbjct: 1 GYRQKVKDIVQGALFPEAGLDNRVGHARGVGGLVIVQDLDLLSYCESCLL 50
>Glyma18g32920.1
Length = 196
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 271 MVSAIASIIKYLGEDPLRKELTGTPRRFVKWLMNFQNSNLDMKLNGFLC 319
MV+A+AS+I+ LGE+PLRKEL GTP RFVKWLMNFQ SN ++KLNGFLC
Sbjct: 1 MVTAVASVIESLGENPLRKELIGTPTRFVKWLMNFQKSNFNIKLNGFLC 49
>Glyma16g10950.1
Length = 176
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query: 1 MGCLDDGSFTVKLENGATNGFAELSVEEEGNN--ATIEDAVKVLLLGLGEDINREGLRKT 58
M C D+ + +LEN + G +E E+E IEDAVKVLLL LGEDINREGLRKT
Sbjct: 1 MDCFDEAN--GELENVVSVGCSEEGSEKEAKTDIGAIEDAVKVLLLALGEDINREGLRKT 58
Query: 59 PLRVAKALREGTRGYKL 75
PLRVAKALREGTR KL
Sbjct: 59 PLRVAKALREGTRVRKL 75
>Glyma04g11890.1
Length = 128
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 39/43 (90%)
Query: 73 YKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSY 115
Y+ KVKDIVQGALFPEAGLDN VGHAGG GGLVIVRDLDL SY
Sbjct: 31 YRQKVKDIVQGALFPEAGLDNRVGHAGGVGGLVIVRDLDLLSY 73
>Glyma03g20880.1
Length = 148
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 44/71 (61%)
Query: 1 MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
MG L +LENG E + E N I+ AVK LL GLGEDINREG+ KTPL
Sbjct: 1 MGHLGQNILNYELENGVNMCCDEDCSKNEINTTLIQYAVKDLLTGLGEDINREGIIKTPL 60
Query: 61 RVAKALREGTR 71
RVAKAL +GTR
Sbjct: 61 RVAKALCDGTR 71
>Glyma13g02320.1
Length = 47
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/36 (72%), Positives = 26/36 (72%)
Query: 72 GYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIV 107
G K DIV ALF EAGLDN VGHAGG GGLVIV
Sbjct: 12 GCKHHTLDIVPSALFLEAGLDNRVGHAGGVGGLVIV 47